Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g00690.t01 | Wine grape | cytosol, extracellular | 91.14 | 15.0 |
| KXG37519 | Sorghum | cytosol, extracellular | 87.34 | 14.38 |
| Zm00001d013245_P001 | Maize | plasma membrane | 87.34 | 14.38 |
| Zm00001d034072_P001 | Maize | extracellular | 87.34 | 14.38 |
| Os03t0757900-01 | Rice | plasma membrane | 86.08 | 14.17 |
| VIT_17s0000g06960.t01 | Wine grape | endoplasmic reticulum, golgi | 84.81 | 12.71 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | ProteinID:CCB47597 | ProteinID:CCB47597.1 | UniProt:F6H5M9 | EMBL:FN595239 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016616 | GO:GO:0051287 | GO:GO:0055114 | PFAM:PF03720 | PANTHER:PTHR11374 | PANTHER:PTHR11374:SF33 |
| SUPFAM:SSF52413 | InterPro:UDP-Glc/GDP-Man_DH_C | InterPro:UDP-Glc/GDP-Man_DH_C_sf | UniParc:UPI000210870D | ArrayExpress:VIT_14s0108g01590 | EnsemblPlantsGene:VIT_14s0108g01590 |
| EnsemblPlants:VIT_14s0108g01590.t01 | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:30134014..30134943
Molecular Weight (calculated)
9143.0 Da
IEP (calculated)
5.019
GRAVY (calculated)
-0.196
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MVWDAYSATK DAHGICILTE WDEFKTLDYK KIYDNMQKPA FVFDGRNIVN AEKLREIGFI VYSIGKPLDP WLKDMPAVA
001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA
Arabidopsis Description
UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [cytosol,vacuole]
SUBAcon: [cytosol,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.