Factsheet for PGSC0003DMT400087395

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115380.1.1	Tomato	nucleus, unclear	97.5	97.5
PGSC0003DMT400083187	Potato	extracellular	90.21	90.21
PGSC0003DMT400003666	Potato	extracellular, vacuole	89.58	89.4
GSMUA_Achr4P03270_001	Banana	cytosol	70.21	89.39
Zm00001d034072_P001	Maize	extracellular	88.33	88.33
Os03t0757900-01	Rice	plasma membrane	88.33	88.33
KXG37519	Sorghum	cytosol, extracellular	88.33	88.33
TraesCS5D01G404300.1	Wheat	golgi	88.12	88.12
Os12t0443600-01	Rice	extracellular	88.12	88.12
GSMUA_Achr4P14320_001	Banana	cytosol	75.21	88.05
TraesCS5B01G399800.1	Wheat	unclear	87.92	87.92
TraesCS5A01G394900.1	Wheat	extracellular, golgi	87.92	87.92
HORVU5Hr1G096370.1	Barley	extracellular, golgi	87.92	87.92
Os12t0443500-01	Rice	plasma membrane	87.71	87.71
TraesCS4A01G199200.1	Wheat	extracellular, golgi	87.71	87.71
HORVU4Hr1G021270.1	Barley	extracellular, golgi	87.71	87.71
TraesCS4D01G113800.1	Wheat	extracellular, golgi	87.5	87.5
Zm00001d013245_P001	Maize	plasma membrane	87.5	87.5
TraesCS4B01G116200.1	Wheat	extracellular, golgi	87.5	87.5
GSMUA_Achr3P30310_001	Banana	cytosol	68.96	87.34
TraesCS4D01G050600.2	Wheat	extracellular	87.29	87.29
PGSC0003DMT400064713	Potato	cytosol	84.38	87.28
GSMUA_Achr6P11090_001	Banana	cytosol	67.08	87.26
TraesCS4B01G050400.1	Wheat	extracellular	87.08	87.08
TraesCS4A01G264600.1	Wheat	extracellular	87.08	87.08
GSMUA_Achr10P...	Banana	cytosol	68.12	86.97
GSMUA_Achr4P07270_001	Banana	extracellular, golgi	68.12	86.97
HORVU4Hr1G008270.1	Barley	extracellular, golgi	86.88	86.88
EER95293	Sorghum	extracellular, vacuole	86.46	86.46
GSMUA_Achr11P...	Banana	cytosol	68.33	85.19
GSMUA_Achr3P18750_001	Banana	extracellular, golgi	63.33	84.44
GSMUA_Achr6P23920_001	Banana	cytosol	57.5	84.4
Os03t0425600-00	Rice	plasma membrane	82.71	82.54
GSMUA_Achr7P26580_001	Banana	cytosol	22.08	81.54
Os03t0604200-01	Rice	plasma membrane	81.88	81.54
TraesCS4B01G077100.1	Wheat	cytosol, vacuole	81.46	81.46
PGSC0003DMT400069038	Potato	cytosol	30.83	81.32
TraesCS4D01G075600.1	Wheat	cytosol, vacuole	81.46	81.29
Zm00001d033188_P001	Maize	extracellular	81.04	80.87
VIT_17s0000g06960.t01	Wine grape	endoplasmic reticulum, golgi	88.75	80.83
TraesCS4A01G237900.1	Wheat	cytosol, vacuole	80.83	80.67
KXG38049	Sorghum	endoplasmic reticulum, extracellular	80.62	77.56
Os04t0581600-01	Rice	cytosol, mitochondrion, peroxisome	20.62	45.21
GSMUA_Achr4P10820_001	Banana	plasma membrane	65.42	42.26
Os03t0147150-00	Rice	plasma membrane	17.71	34.84

Protein Annotations

KEGG:00040+1.1.1.22	KEGG:00053+1.1.1.22	KEGG:00520+1.1.1.22	Gene3D:1.20.5.100	EntrezGene:102598804	MapMan:3.13.3.1
Gene3D:3.40.50.720	InterPro:6-PGluconate_DH-like_C_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003979	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016616
GO:GO:0051287	GO:GO:0055114	UniProt:M1DDR8	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00984	PFAM:PF03720
PFAM:PF03721	EnsemblPlantsGene:PGSC0003DMG400036966	PGSC:PGSC0003DMG400036966	EnsemblPlants:PGSC0003DMT400087395	PIRSF:PIRSF000124	PIRSF:PIRSF500133
PANTHER:PTHR11374	PANTHER:PTHR11374:SF30	SMART:SM00984	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52413
TIGRFAMs:TIGR03026	InterPro:UDP-Glc/GDP-Man	InterPro:UDP-Glc/GDP-Man_DH_C	InterPro:UDP-Glc/GDP-Man_DH_C_sf	InterPro:UDP-Glc/GDP-Man_DH_N	InterPro:UDP-Glc/GDP-Man_DH_dimer
InterPro:UDPglc_DH_euk	UniParc:UPI0002960517	RefSeq:XP_006345151.1	RefSeq:XP_015163205.1	RefSeq:XP_015163206.1	:

Description

UDP-glucose 6-dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400036966]

Coordinates

chr3:+:55259886..55261328

Molecular Weight (calculated)

52827.5 Da

IEP (calculated)

6.424

GRAVY (calculated)

-0.083

Length

480 amino acids

Sequence
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPSIEVA VVDISVARIT AWNSDELPIY EPGLDDVVKQ CRGKNLFFCT EVEKHVSEAD IIFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSKSD KIVVEKSTVP VKTAEAIEKI LTHNSKGINY QILSNPEFLA EGTAIQDLFH PDRVLIGGRD TPEGQKAIQT LKKVYAHWVP
201: EDRIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSNA VGKDSRIGPK FLNASVGFGG SCFQKDILNL VYICECNGLP EVASYWKQVI
301: KVNDYQKSRF VNRMVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC KGLLGDNAHL SIYDPQVTQE QIQRDLSMEK FDWDHPTHLQ PMSPYGVKQV
401: NVVSDAHEAT KDAHGLCILT EWDEFKTLDF KRIYDNMQKP AFVFDGRNVV DASKLREIGF IVYSIGKPLD AWLKDMPAVA

Best Arabidopsis Sequence Match ( AT3G29360.2 )
(BLAST)

001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA

Arabidopsis Description

UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
SUBAcon: [vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.