Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • golgi 1
  • cytosol 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:golgi
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr3P18750_001
GSMUA_Achr3P30310_001
GSMUA_Achr4P03270_001
GSMUA_Achr4P07270_001
GSMUA_Achr4P10820_001
GSMUA_Achr4P14320_001
GSMUA_Achr6P11090_001
GSMUA_Achr6P23920_001
GSMUA_Achr7P26580_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G39320.1 GSMUA_Achr10P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr11P... AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P18750_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr3P30310_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P03270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P07270_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P10820_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr4P14320_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P11090_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr6P23920_001 AT1G26570.1 21798944
AT5G39320.1 GSMUA_Achr7P26580_001 AT1G26570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P03270_001 Banana cytosol 93.67 94.16
GSMUA_Achr7P26580_001 Banana cytosol 31.4 91.54
GSMUA_Achr6P11090_001 Banana cytosol 86.54 88.89
GSMUA_Achr10P... Banana cytosol 86.81 87.5
GSMUA_Achr6P23920_001 Banana cytosol 73.09 84.71
GSMUA_Achr4P14320_001 Banana cytosol 91.03 84.15
GSMUA_Achr4P07270_001 Banana extracellular, golgi 76.25 76.86
GSMUA_Achr11P... Banana cytosol 77.84 76.62
CDX69521 Canola cytosol 72.82 74.8
GSMUA_Achr3P18750_001 Banana extracellular, golgi 70.45 74.17
PGSC0003DMT400069038 Potato cytosol 34.56 71.98
EER95293 Sorghum extracellular, vacuole 90.77 71.67
TraesCS4B01G116200.1 Wheat extracellular, golgi 89.71 70.83
TraesCS4A01G199200.1 Wheat extracellular, golgi 89.71 70.83
HORVU4Hr1G021270.1 Barley extracellular, golgi 89.71 70.83
TraesCS4D01G113800.1 Wheat extracellular, golgi 89.45 70.62
Solyc02g088690.2.1 Tomato nucleus 58.58 70.25
Bra008695.1-P Field mustard extracellular, golgi 88.65 70.0
PGSC0003DMT400003666 Potato extracellular, vacuole 88.65 69.85
PGSC0003DMT400064713 Potato cytosol 85.49 69.83
AT5G15490.1 Thale cress extracellular, vacuole 88.13 69.58
Bra006303.1-P Field mustard extracellular, vacuole 88.13 69.58
CDY26425 Canola extracellular, golgi 88.13 69.58
KRH44990 Soybean nucleus 87.6 69.17
AT3G29360.1 Thale cress cytosol, vacuole 87.6 69.17
CDY37001 Canola cytosol, vacuole 87.34 68.96
PGSC0003DMT400087395 Potato cytosol, golgi 87.34 68.96
KRH18404 Soybean endoplasmic reticulum 87.34 68.96
KRG93627 Soybean endoplasmic reticulum 87.07 68.75
CDX67427 Canola cytosol, vacuole 87.07 68.75
Bra028430.1-P Field mustard cytosol, vacuole 87.07 68.75
KRH01262 Soybean nucleus 87.07 68.75
Bra028234.1-P Field mustard extracellular, vacuole 86.81 68.54
KRH75016 Soybean endoplasmic reticulum 86.81 68.54
AT5G39320.1 Thale cress extracellular 86.54 68.33
KRH70872 Soybean endoplasmic reticulum 86.54 68.33
Solyc03g115380.1.1 Tomato nucleus, unclear 86.28 68.12
Solyc06g069550.1.1 Tomato extracellular 86.02 67.92
Os03t0425600-00 Rice plasma membrane 86.02 67.78
KRH15845 Soybean cytosol 59.1 67.67
PGSC0003DMT400083187 Potato extracellular 85.49 67.5
Solyc02g067080.2.1 Tomato extracellular 88.92 66.21
AT1G26570.1 Thale cress cytosol, extracellular 83.64 65.9
AT3G01010.1 Thale cress cytosol 27.44 65.82
Bra024708.1-P Field mustard cytosol, extracellular 82.85 65.28
CDY16166 Canola cytosol 82.32 64.86
KRH56847 Soybean cytosol 79.16 62.76
KRG89491 Soybean cytosol 48.81 62.71
KRH03109 Soybean cytosol 79.16 62.63
CDX74475 Canola extracellular 41.95 61.63
Bra026264.1-P Field mustard extracellular, vacuole 39.58 60.73
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 88.39 59.93
CDX78633 Canola cytosol 88.39 59.19
CDX90989 Canola cytosol, golgi 85.49 59.12
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 39.84 53.74
Bra023520.1-P Field mustard golgi 85.49 52.17
CDX85549 Canola cytosol 85.75 48.44
GSMUA_Achr4P10820_001 Banana plasma membrane 77.31 39.43
CDX85269 Canola cytosol 22.16 38.18
Bra025395.1-P Field mustard cytosol 9.23 36.84
CDX86369 Canola cytosol 8.71 35.87
Bra030352.1-P Field mustard extracellular 3.17 16.67
CDY15951 Canola extracellular 3.17 16.67
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sfGO:GO:0000166GO:GO:0000271GO:GO:0003674GO:GO:0003824GO:GO:0003979
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016491
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr3G30310_001EnsemblPlants:GSMUA_Achr3P30310_001EnsemblPlants:GSMUA_Achr3T30310_001
UniProt:M0SJ45InterPro:NAD(P)-bd_dom_sfPFAM:PF00984PFAM:PF03720PFAM:PF03721PIRSF:PIRSF000124
PIRSF:PIRSF500134PANTHER:PTHR11374PANTHER:PTHR11374:SF30SMART:SM00984SUPFAM:SSF48179SUPFAM:SSF51735
SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_N
InterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_bacUniParc:UPI000294CA40:::
Description
UDP-glucose 6-dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr3G30310_001]
Coordinates
chr3:-:29117412..29120149
Molecular Weight (calculated)
41830.3 Da
IEP (calculated)
7.861
GRAVY (calculated)
-0.046
Length
379 amino acids
Sequence
(BLAST)
001: MVKICCIGAG YQCRGRNLFF STDVEKHVCE ADIIFVSVNT PTKTRGLGAG KAADLTYWES AARMIADVSK SDKIVVEKST VPVKTAEAIE KILTHNSKGI
101: SYQILSNPEF LAEEVYANWV PEDRIITTNL WSAELSKLAA NAILAQRISS VNAISALCEA TGANVSEVAY AVGKDSRIGP KFLNASVGFG GSCFQKDILN
201: LVYICECNGL PEVATYWKQV IKINDYQKSR FVNRVVSSMF NTVSGKKIAV LGFAFKKDTG DTRETPAIDV CKGLLGDKAK ISIYDPQVSA DQIRPVKEVT
301: VTWDAYEATK GAHGVCILTE WDEFKRLDYA KIYENMQKPA FIFDGRNVVN PEKLREIGFI VYSIGKPLDQ WLKDMPAVV
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.