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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, cytosol

Predictor Summary:
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, vacuole
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g088690.2.1 Tomato nucleus 61.04 92.72
AT5G39320.1 Thale cress extracellular 92.71 92.71
AT5G15490.1 Thale cress extracellular, vacuole 91.46 91.46
KRH44990 Soybean nucleus 91.46 91.46
KRH18404 Soybean endoplasmic reticulum 90.83 90.83
KRG93627 Soybean endoplasmic reticulum 90.62 90.62
KRH01262 Soybean nucleus 90.62 90.62
PGSC0003DMT400003666 Potato extracellular, vacuole 90.21 90.02
TraesCS4A01G199200.1 Wheat extracellular, golgi 89.58 89.58
HORVU4Hr1G021270.1 Barley extracellular, golgi 89.58 89.58
TraesCS4B01G116200.1 Wheat extracellular, golgi 89.38 89.38
TraesCS4D01G113800.1 Wheat extracellular, golgi 89.38 89.38
KXG37519 Sorghum cytosol, extracellular 89.17 89.17
Zm00001d034072_P001 Maize extracellular 89.17 89.17
TraesCS5B01G399800.1 Wheat unclear 88.75 88.75
TraesCS5D01G404300.1 Wheat golgi 88.54 88.54
HORVU5Hr1G096370.1 Barley extracellular, golgi 88.54 88.54
Zm00001d013245_P001 Maize plasma membrane 88.54 88.54
TraesCS5A01G394900.1 Wheat extracellular, golgi 88.33 88.33
GSMUA_Achr4P03270_001 Banana cytosol 69.17 88.06
GSMUA_Achr4P14320_001 Banana cytosol 75.21 88.05
HORVU4Hr1G008270.1 Barley extracellular, golgi 87.92 87.92
PGSC0003DMT400064713 Potato cytosol 84.79 87.72
Os03t0757900-01 Rice plasma membrane 87.71 87.71
GSMUA_Achr3P30310_001 Banana cytosol 69.17 87.6
Os12t0443500-01 Rice plasma membrane 87.5 87.5
Os12t0443600-01 Rice extracellular 87.5 87.5
TraesCS4D01G050600.2 Wheat extracellular 87.29 87.29
EER95293 Sorghum extracellular, vacuole 87.08 87.08
TraesCS4A01G264600.1 Wheat extracellular 87.08 87.08
TraesCS4B01G050400.1 Wheat extracellular 86.88 86.88
GSMUA_Achr4P07270_001 Banana extracellular, golgi 67.5 86.17
GSMUA_Achr6P11090_001 Banana cytosol 66.04 85.91
GSMUA_Achr10P... Banana cytosol 66.88 85.37
GSMUA_Achr6P23920_001 Banana cytosol 57.71 84.71
GSMUA_Achr11P... Banana cytosol 67.92 84.68
Bra025395.1-P Field mustard cytosol 16.67 84.21
GSMUA_Achr3P18750_001 Banana extracellular, golgi 63.12 84.17
AT1G26570.1 Thale cress cytosol, extracellular 84.17 83.99
Os03t0425600-00 Rice plasma membrane 83.54 83.37
PGSC0003DMT400069038 Potato cytosol 31.46 82.97
Solyc02g067080.2.1 Tomato extracellular 87.71 82.71
CDX86369 Canola cytosol 15.83 82.61
GSMUA_Achr7P26580_001 Banana cytosol 22.29 82.31
TraesCS4B01G077100.1 Wheat cytosol, vacuole 81.67 81.67
Os03t0604200-01 Rice plasma membrane 81.88 81.54
TraesCS4D01G075600.1 Wheat cytosol, vacuole 81.67 81.5
AT3G01010.1 Thale cress cytosol 26.67 81.01
TraesCS4A01G237900.1 Wheat cytosol, vacuole 81.04 80.87
Zm00001d033188_P001 Maize extracellular 80.42 80.25
KXG38049 Sorghum endoplasmic reticulum, extracellular 80.0 76.95
CDX85269 Canola cytosol 32.92 71.82
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 41.88 71.53
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 20.0 43.84
GSMUA_Achr4P10820_001 Banana plasma membrane 65.62 42.4
Os03t0147150-00 Rice plasma membrane 17.71 34.84
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1Gene3D:3.40.50.720
InterPro:6-PGluconate_DH-like_C_sfEntrezGene:822594ProteinID:AEE77573.1ProteinID:AEE77574.1EMBL:AF424576EMBL:AK226539
ArrayExpress:AT3G29360EnsemblPlantsGene:AT3G29360RefSeq:AT3G29360TAIR:AT3G29360RefSeq:AT3G29360-TAIR-GEnsemblPlants:AT3G29360.1
TAIR:AT3G29360.1EMBL:AY088902ProteinID:BAB02581.1EMBL:BT021126EMBL:BT029164GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003979GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006024
GO:GO:0006065GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016043GO:GO:0016491GO:GO:0016616GO:GO:0051287GO:GO:0052546GO:GO:0055114
InterPro:NAD(P)-bd_dom_sfRefSeq:NP_001030792.1RefSeq:NP_189582.1PFAM:PF00984PFAM:PF03720PFAM:PF03721
PIRSF:PIRSF000124PIRSF:PIRSF500133PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281PANTHER:PTHR11374PANTHER:PTHR11374:SF30UniProt:Q9LIA8SMART:SM00984SUPFAM:SSF48179
SUPFAM:SSF51735SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_CInterPro:UDP-Glc/GDP-Man_DH_C_sf
InterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimerInterPro:UDPglc_DH_eukUniParc:UPI00000A4A04::
Description
UGD2UDP-glucose 6-dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA8]
Coordinates
chr3:-:11267007..11269356
Molecular Weight (calculated)
53175.9 Da
IEP (calculated)
5.775
GRAVY (calculated)
-0.090
Length
480 amino acids
Sequence
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPDVEVA VVDISVPRIN AWNSDTLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIKDLFN PDRVLIGGRE TPEGFKAVQT LKNVYAHWVP
201: EGQIITTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GADVTQVSYA VGTDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKSRF VNRVVSSMFN SVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLEDKARL SIYDPQVTED QIQRDLSMNK FDWDHPLHLQ PMSPTTVKQV
401: TVTWDAYEAT KDAHGICIMT EWDEFKNLDF QKIFDNMQKP AFVFDGRNIM NLQKLREIGF IVYSIGKPLD DWLKDMPAVA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.