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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006303.1-P Field mustard extracellular, vacuole 84.63 99.79
CDX69521 Canola cytosol 64.84 99.46
CDY26425 Canola extracellular, golgi 83.92 98.96
AT5G15490.1 Thale cress extracellular, vacuole 83.04 97.92
AT3G01010.1 Thale cress cytosol 26.5 94.94
Solyc02g088690.2.1 Tomato nucleus 51.24 91.77
CDX74475 Canola extracellular 41.17 90.31
TraesCS5D01G404300.1 Wheat golgi 76.5 90.21
KRH01262 Soybean nucleus 76.5 90.21
KXG37519 Sorghum cytosol, extracellular 76.5 90.21
CDX70614 Canola cytosol, mitochondrion, peroxisome, plastid 89.05 90.16
TraesCS5B01G399800.1 Wheat unclear 76.33 90.0
PGSC0003DMT400064713 Potato cytosol 73.67 89.87
TraesCS5A01G394900.1 Wheat extracellular, golgi 76.15 89.79
KRH44990 Soybean nucleus 76.15 89.79
Zm00001d034072_P001 Maize extracellular 76.15 89.79
HORVU5Hr1G096370.1 Barley extracellular, golgi 76.15 89.79
EER95293 Sorghum extracellular, vacuole 75.97 89.58
GSMUA_Achr4P03270_001 Banana cytosol 59.54 89.39
GSMUA_Achr4P14320_001 Banana cytosol 64.66 89.27
Zm00001d013245_P001 Maize plasma membrane 75.62 89.17
GSMUA_Achr10P... Banana cytosol 59.19 89.1
Os12t0443600-01 Rice extracellular 75.44 88.96
CDX67427 Canola cytosol, vacuole 75.44 88.96
TraesCS4D01G050600.2 Wheat extracellular 75.44 88.96
CDY37001 Canola cytosol, vacuole 75.44 88.96
KRH18404 Soybean endoplasmic reticulum 75.44 88.96
GSMUA_Achr6P11090_001 Banana cytosol 57.95 88.89
PGSC0003DMT400003666 Potato extracellular, vacuole 75.44 88.77
TraesCS4A01G199200.1 Wheat extracellular, golgi 75.27 88.75
Os12t0443500-01 Rice plasma membrane 75.27 88.75
TraesCS4B01G116200.1 Wheat extracellular, golgi 75.27 88.75
HORVU4Hr1G021270.1 Barley extracellular, golgi 75.27 88.75
HORVU4Hr1G008270.1 Barley extracellular, golgi 75.27 88.75
TraesCS4D01G113800.1 Wheat extracellular, golgi 75.09 88.54
Os03t0757900-01 Rice plasma membrane 75.09 88.54
GSMUA_Achr3P30310_001 Banana cytosol 59.19 88.39
TraesCS4B01G050400.1 Wheat extracellular 74.91 88.33
TraesCS4A01G264600.1 Wheat extracellular 74.91 88.33
GSMUA_Achr4P07270_001 Banana extracellular, golgi 58.66 88.3
KRG93627 Soybean endoplasmic reticulum 74.73 88.12
GSMUA_Achr11P... Banana cytosol 59.72 87.79
Os03t0425600-00 Rice plasma membrane 73.14 86.07
GSMUA_Achr7P26580_001 Banana cytosol 19.61 85.38
PGSC0003DMT400069038 Potato cytosol 27.39 85.16
GSMUA_Achr6P23920_001 Banana cytosol 49.12 85.02
GSMUA_Achr3P18750_001 Banana extracellular, golgi 54.06 85.0
CDX90989 Canola cytosol, golgi 81.63 84.31
Solyc02g067080.2.1 Tomato extracellular 75.8 84.28
TraesCS4B01G077100.1 Wheat cytosol, vacuole 69.79 82.29
Os03t0604200-01 Rice plasma membrane 69.96 82.16
TraesCS4D01G075600.1 Wheat cytosol, vacuole 69.79 82.12
TraesCS4A01G237900.1 Wheat cytosol, vacuole 69.43 81.7
CDX86369 Canola cytosol 13.25 81.52
CDY16166 Canola cytosol 69.26 81.5
Zm00001d033188_P001 Maize extracellular 69.08 81.29
KXG38049 Sorghum endoplasmic reticulum, extracellular 68.9 78.16
Solyc03g065350.1.1 Tomato cytosol, extracellular, peroxisome 36.4 73.31
CDX85549 Canola cytosol 84.1 70.94
CDX85269 Canola cytosol 27.56 70.91
CDY15951 Canola extracellular 6.71 52.78
Os04t0581600-01 Rice cytosol, mitochondrion, peroxisome 17.31 44.75
GSMUA_Achr4P10820_001 Banana plasma membrane 56.36 42.93
Os03t0147150-00 Rice plasma membrane 15.02 34.84
Protein Annotations
KEGG:00040+1.1.1.22KEGG:00053+1.1.1.22KEGG:00500+1.1.1.22KEGG:00520+1.1.1.22Gene3D:1.20.5.100MapMan:3.13.3.1
Gene3D:3.40.50.720InterPro:6-PGluconate_DH-like_C_sfGO:A0A078CU27EnsemblPlants:CDX78633ProteinID:CDX78633ProteinID:CDX78633.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016616GO:GO:0051287GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00130050001InterPro:NAD(P)-bd_dom_sfPFAM:PF00984
PFAM:PF03720PFAM:PF03721PANTHER:PTHR11374PANTHER:PTHR11374:SF30MetaCyc:PWY-7346SMART:SM00984
SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52413TIGRFAMs:TIGR03026InterPro:UDP-Glc/GDP-ManInterPro:UDP-Glc/GDP-Man_DH_C
InterPro:UDP-Glc/GDP-Man_DH_C_sfInterPro:UDP-Glc/GDP-Man_DH_NInterPro:UDP-Glc/GDP-Man_DH_dimerUniPathway:UPA00038UniParc:UPI0004EDE290:
Description
BnaA03g05450D
Coordinates
chrLK031815:-:1595721..1598166
Molecular Weight (calculated)
62823.7 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.051
Length
566 amino acids
Sequence
(BLAST)
001: MDMGNHWTAR PFDTSNVSPI YQGHFRNLIT YINSLLAPLV FNIVRFSAIH LVSPAIFSDS VHQRLHILHK GSICVGDPRK THLISTMVKI CCIGAGYVGG
101: PTMAVIALKC PSVEVAVVDI SVPRINAWNS DQLPIYEPGL DDVVKQCRGK NLFFSTDVEK HVREADIVFV SVNTPTKTRG LGAGKAADLT YWESAARMIA
201: DVSVSDKIVV EKSTVPVKTA EAIEKILTHN SKGIKFQILS NPEFLAEGTA IEDLFKPDRV LIGGRETTEG FAAVKALKDV YSQWVPEERI LTTNLWSAEL
301: SKLAANAFLA QRISSVNAMS ALCEATGANV SEVSYAVGKD SRIGPKFLNS SVGFGGSCFQ KDILNLVYIC ECNGLPEVAE YWKQVIKIND YQKTRFVNRI
401: VSSMFNTVSN KKIAVLGFAF KKDTGDTRET PAIDVCKGLL GDKARISIYD PQVTEEQIQR DLTMNKFDWD HPLHLQPMSP TTVKQVSVAW DAYAATKDAH
501: GICILTEWDE FKKLDYERIF ENMQKPAFVF DGRNVVDAEK LRKIGFIVYS IGKPLDQWLK DMPALA
Best Arabidopsis Sequence Match ( AT5G15490.1 )
(BLAST)
001: MVKICCIGAG YVGGPTMAVI ALKCPSVEVA VVDISVPRIN AWNSDQLPIY EPGLDDVVKQ CRGKNLFFST DVEKHVREAD IVFVSVNTPT KTRGLGAGKA
101: ADLTYWESAA RMIADVSVSD KIVVEKSTVP VKTAEAIEKI LTHNSKGIKF QILSNPEFLA EGTAIEDLFM PDRVLIGGRE TTEGFAAVKA LKDIYAQWVP
201: EERILTTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT GANVSEVSYA VGKDSRIGPK FLNSSVGFGG SCFQKDILNL VYICECNGLP EVAEYWKQVI
301: KINDYQKTRF VNRIVSSMFN TVSNKKIAVL GFAFKKDTGD TRETPAIDVC KGLLGDKARL SIYDPQVTEE QIQRDLTMNK FDWDHPLHLQ PMSPTTVKQV
401: SVAWDAYTAT KDAHGICILT EWDEFKKLDF QRIFENMQKP AFVFDGRNVV DADKLREIGF IVYSIGKPLD QWLKDMPALA
Arabidopsis Description
UGD3UDP-glucose 6-dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJW9]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.