Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G071330.3 | nucleus |
| HORVU2Hr1G004820.2 | nucleus |
| HORVU4Hr1G013700.2 | nucleus |
| HORVU4Hr1G039870.1 | |
| HORVU4Hr1G039880.1 | |
| HORVU5Hr1G018180.1 | nucleus |
| HORVU5Hr1G050270.8 | nucleus, nucleus |
| HORVU5Hr1G059770.2 | nucleus |
| HORVU7Hr1G073410.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G162700.4 | Wheat | nucleus, plastid | 91.92 | 95.79 |
| TraesCS7A01G264800.1 | Wheat | nucleus | 91.92 | 95.79 |
| TraesCS7D01G265600.3 | Wheat | nucleus | 91.64 | 94.75 |
| Os08t0538700-01 | Rice | nucleus | 79.14 | 83.37 |
| EES14166 | Sorghum | nucleus | 76.69 | 80.63 |
| Zm00001d031678_P003 | Maize | cytosol, nucleus, plastid | 75.47 | 78.49 |
| Zm00001d052695_P016 | Maize | nucleus | 74.25 | 78.45 |
| GSMUA_Achr8P00470_001 | Banana | nucleus | 63.44 | 67.16 |
| VIT_04s0008g02780.t01 | Wine grape | nucleus | 57.05 | 60.34 |
| KRH13310 | Soybean | nucleus | 56.86 | 60.2 |
| KRH20664 | Soybean | nucleus | 57.05 | 59.86 |
| KRH63701 | Soybean | nucleus | 56.77 | 59.57 |
| PGSC0003DMT400030280 | Potato | nucleus | 56.02 | 58.66 |
| Solyc09g091280.2.1 | Tomato | cytosol | 55.83 | 58.35 |
| AT3G12280.1 | Thale cress | nucleus | 54.7 | 57.45 |
| CDY08440 | Canola | nucleus | 53.95 | 56.5 |
| Bra034764.1-P | Field mustard | nucleus | 53.85 | 56.4 |
| CDY42141 | Canola | cytosol | 53.76 | 56.24 |
| CDY52614 | Canola | cytosol | 53.2 | 56.15 |
| CDY50559 | Canola | nucleus | 52.91 | 55.47 |
| Bra038707.1-P | Field mustard | nucleus | 53.01 | 55.35 |
| CDX73827 | Canola | nucleus | 51.79 | 54.5 |
| Bra001446.1-P | Field mustard | nucleus | 51.41 | 53.26 |
| VIT_14s0068g00840.t01 | Wine grape | cytosol | 29.32 | 53.06 |
| CDY00765 | Canola | mitochondrion | 52.26 | 49.82 |
| HORVU4Hr1G039890.2 | Barley | cytosol, nucleus, plastid | 44.74 | 48.57 |
| CDY52391 | Canola | nucleus | 8.74 | 40.26 |
Protein Annotations
| Gene3D:1.10.472.10 | Gene3D:1.10.472.140 | MapMan:13.1.2.1 | UniProt:A0A287WKG5 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006357 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0051726 | EnsemblPlantsGene:HORVU7Hr1G055440 | EnsemblPlants:HORVU7Hr1G055440.9 | PFAM:PF01857 | PFAM:PF01858 | PFAM:PF08934 |
| PFAM:PF11934 | PANTHER:PTHR13742 | PANTHER:PTHR13742:SF22 | InterPro:RBR | InterPro:RB_A | InterPro:RB_B |
| InterPro:RB_C | InterPro:RB_N | InterPro:RB_fam | SMART:SM01367 | SMART:SM01368 | SUPFAM:SSF47954 |
| UniParc:UPI000B4640B0 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:227367223..227373505
Molecular Weight (calculated)
117512.0 Da
IEP (calculated)
9.000
GRAVY (calculated)
-0.270
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: FPPAPPPRPF SSPPRRPTAT TLLPARRSPD SVRPRSSYWG RQPMDGADAP QPARSGSGVT ASTAPGRMNG GASANANAAA MEERFADVCK RKLVLDESTT
0101: RQAMQLFKET KIILLSSMSS LGSGSPEEIE RSWSACVLYC VSKLGNAGKA KEDRAITLRQ ILRAFELKIV DFFKEMPQFC IKVGFILTGL YGSDWEKRLE
0201: LQELQANLVH LCSLGRQHYR RAYQELFLLN DGKPANNSSD LNLQQASEYY NFGWLLFLVL RNQASSAVKN LLTSTTELVS VLAVLIIHIP VRLRNFSIED
0301: SSCFAKKSEK GVNLIASLCE RYLTSEDELS KALQKTNILI TDILKKKPCS DVSECQQGCL SFIDPEGLVF FKNFLEEDSL KSSLQVLERE YENGLDTKGE
0401: LDARMFANDE DSLLGSGSLS GGALKLPGTK RKYDDVMASP TKSTASRAPM SPPRFCPSPN GNSFCNSKMA PFTPVSTAMT TAKWLRSTIS PLPSKPSGEL
0501: LRFFSACDKD VTDDITCRAA IILGAIFTGS SFGERMCTSL RNTNGMDAIW TEQRKMEALK LYYRVLESMC RAESQILSGS NLTSLLSNER FHRCMIACSA
0601: ELVLATHKTV TMMFPAVLEK TGITAFDLSK VIESFVRHED TLPRELKRHL NSLEERLLES MAWEKGSSMY NSLIVARPTL SLEINRLGLL AEPMPSLDAI
0701: AVHHDISLGG LPPLPFQKQE RSPGNKDEVR SPKRACTERR NVLADNSFRS PVKDAIKSKF LPPLQSAFAS PTRPNPAAGG ETCAETGIGV FLSKITKLAA
0801: IRIKCLCERL QLSQQILERV YSLAQQIISQ QTALFFNRHI DQIILCCIYG VAKISQLALT FKEIIFSYRK QSQCKPQVFR SVYVNWPSRS RSGKIGEDHV
0901: DIITFYNEVF IPTVKPLLVD LGPGTSPNRN NEPKSGGDAP FPESPRLSRF PNLPDMSPKK VSATHNVYVS PLRSSKMDTL LSPSSKSYYA CVGESTHAFQ
1001: SPSKDLNAIN TRLNSGKKVN GRLNFDVVSD LVVARSLSDQ NDGSASAMAV FGTKTPVKGE QPDP
0101: RQAMQLFKET KIILLSSMSS LGSGSPEEIE RSWSACVLYC VSKLGNAGKA KEDRAITLRQ ILRAFELKIV DFFKEMPQFC IKVGFILTGL YGSDWEKRLE
0201: LQELQANLVH LCSLGRQHYR RAYQELFLLN DGKPANNSSD LNLQQASEYY NFGWLLFLVL RNQASSAVKN LLTSTTELVS VLAVLIIHIP VRLRNFSIED
0301: SSCFAKKSEK GVNLIASLCE RYLTSEDELS KALQKTNILI TDILKKKPCS DVSECQQGCL SFIDPEGLVF FKNFLEEDSL KSSLQVLERE YENGLDTKGE
0401: LDARMFANDE DSLLGSGSLS GGALKLPGTK RKYDDVMASP TKSTASRAPM SPPRFCPSPN GNSFCNSKMA PFTPVSTAMT TAKWLRSTIS PLPSKPSGEL
0501: LRFFSACDKD VTDDITCRAA IILGAIFTGS SFGERMCTSL RNTNGMDAIW TEQRKMEALK LYYRVLESMC RAESQILSGS NLTSLLSNER FHRCMIACSA
0601: ELVLATHKTV TMMFPAVLEK TGITAFDLSK VIESFVRHED TLPRELKRHL NSLEERLLES MAWEKGSSMY NSLIVARPTL SLEINRLGLL AEPMPSLDAI
0701: AVHHDISLGG LPPLPFQKQE RSPGNKDEVR SPKRACTERR NVLADNSFRS PVKDAIKSKF LPPLQSAFAS PTRPNPAAGG ETCAETGIGV FLSKITKLAA
0801: IRIKCLCERL QLSQQILERV YSLAQQIISQ QTALFFNRHI DQIILCCIYG VAKISQLALT FKEIIFSYRK QSQCKPQVFR SVYVNWPSRS RSGKIGEDHV
0901: DIITFYNEVF IPTVKPLLVD LGPGTSPNRN NEPKSGGDAP FPESPRLSRF PNLPDMSPKK VSATHNVYVS PLRSSKMDTL LSPSSKSYYA CVGESTHAFQ
1001: SPSKDLNAIN TRLNSGKKVN GRLNFDVVSD LVVARSLSDQ NDGSASAMAV FGTKTPVKGE QPDP
0001: MEEVQPPVTP PIEPNGKRSE ASLLDICEKV LSLDGSTCDE ALKLFTETKR ILSASMSNIG SGTREEVERF WFAFILYSVK RLSVRKEADG LSVSGDNEFN
0101: LCQILRALKL NIVDFFKELP QFVVKAGSVL GELYGADWEN RLQAKEVQAN FVHLSLLSKY YKRGFREFFL TYDANAEKNS ANSSTYLLDS YRFGWLLFLA
0201: LRNHAFSRFK DLVTCSNGVV SILAILIIHV PCRFRNFSIQ DSSRFVKKGD KGVDLVASLC KIYDASEDEL RIVIDKANNL VETILKKKPS PASECQTDKL
0301: DNIDPDGLTY FEDLLEETSI STSLITLEKD YYDGKGELDE RVFINEEDSL LGSGSLSAGA VNITGVKRKI DALSSPARTF ISPLSPHKSP AAKTNGISGA
0401: TKLAATPVST AMTTAKWLRT VISPLLPKPS PGLEHFLKSC DRDITNDVTR RAHIILEAIF PNSSLGAQCG GGSLQAVDLM DDIWAEQRRL EACKLYYRVL
0501: EAMCKAEAQI LHANNLNSLL TNERFHRCML ACSAELVLAT HKTITMLFPA VLERTGITAF DLSKVIESFI RHEDSLPREL RRHLNSLEER LLESMVWEKG
0601: SSMYNSLIVA RPSLALEINQ LGLLAEPMPS LDAIAALINF SDGANHASSV QKHETCPGQN GGIRSPKRLC TDYRSILVER NSFTSPVKDR LLALGNVKSK
0701: MLPPPLQSAF ASPTRPNPGG GGETCAETGI NIFFTKINKL AAVRINGMVE RLQLSQQIRE SVYCFFQHVL AQRTSLLFSR HIDQIILCCF YGVAKISQMS
0801: LTFREIIYNY RKQPQCKPLV FRSVYVDALQ CRRQGRIGPD HVDIITFYNE IFIPAVKPLL VELGPVRNDR AVEANNKPEG QCPGSPKVSV FPSVPDMSPK
0901: KVSAVHNVYV SPLRGSKMDA LISHSTKSYY ACVGESTHAY QSPSKDLSAI NNRLNNSSNR KRTLNFDAEA GMVSDSMVAN SLNLQNQNQN QNGSDASSSG
1001: GAAPLKTEPT DS
0101: LCQILRALKL NIVDFFKELP QFVVKAGSVL GELYGADWEN RLQAKEVQAN FVHLSLLSKY YKRGFREFFL TYDANAEKNS ANSSTYLLDS YRFGWLLFLA
0201: LRNHAFSRFK DLVTCSNGVV SILAILIIHV PCRFRNFSIQ DSSRFVKKGD KGVDLVASLC KIYDASEDEL RIVIDKANNL VETILKKKPS PASECQTDKL
0301: DNIDPDGLTY FEDLLEETSI STSLITLEKD YYDGKGELDE RVFINEEDSL LGSGSLSAGA VNITGVKRKI DALSSPARTF ISPLSPHKSP AAKTNGISGA
0401: TKLAATPVST AMTTAKWLRT VISPLLPKPS PGLEHFLKSC DRDITNDVTR RAHIILEAIF PNSSLGAQCG GGSLQAVDLM DDIWAEQRRL EACKLYYRVL
0501: EAMCKAEAQI LHANNLNSLL TNERFHRCML ACSAELVLAT HKTITMLFPA VLERTGITAF DLSKVIESFI RHEDSLPREL RRHLNSLEER LLESMVWEKG
0601: SSMYNSLIVA RPSLALEINQ LGLLAEPMPS LDAIAALINF SDGANHASSV QKHETCPGQN GGIRSPKRLC TDYRSILVER NSFTSPVKDR LLALGNVKSK
0701: MLPPPLQSAF ASPTRPNPGG GGETCAETGI NIFFTKINKL AAVRINGMVE RLQLSQQIRE SVYCFFQHVL AQRTSLLFSR HIDQIILCCF YGVAKISQMS
0801: LTFREIIYNY RKQPQCKPLV FRSVYVDALQ CRRQGRIGPD HVDIITFYNE IFIPAVKPLL VELGPVRNDR AVEANNKPEG QCPGSPKVSV FPSVPDMSPK
0901: KVSAVHNVYV SPLRGSKMDA LISHSTKSYY ACVGESTHAY QSPSKDLSAI NNRLNNSSNR KRTLNFDAEA GMVSDSMVAN SLNLQNQNQN QNGSDASSSG
1001: GAAPLKTEPT DS
Arabidopsis Description
RBR1RBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.