Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G031400.1 | Wheat | plastid | 80.8 | 22.0 |
| TraesCS2A01G031800.1 | Wheat | plastid | 78.4 | 21.68 |
| TraesCS2B01G043500.1 | Wheat | plastid | 78.4 | 21.21 |
| KRH07603 | Soybean | cytosol | 22.4 | 14.81 |
| Os04t0112200-00 | Rice | nucleus, plastid | 42.4 | 11.04 |
| EES11756 | Sorghum | plastid | 43.2 | 11.02 |
| Zm00001d004512_P001 | Maize | plastid | 36.0 | 9.62 |
| Bra014096.1-P | Field mustard | nucleus | 27.2 | 9.26 |
| CDY16998 | Canola | nucleus | 27.2 | 9.26 |
| CDY17797 | Canola | nucleus | 26.4 | 8.75 |
| GSMUA_Achr4P17950_001 | Banana | nucleus | 28.0 | 8.66 |
| AT1G47870.1 | Thale cress | nucleus, plastid | 27.2 | 8.59 |
| Solyc04g081350.2.1 | Tomato | plastid | 25.6 | 8.06 |
| KRH51709 | Soybean | nucleus | 27.2 | 7.98 |
| KRH61047 | Soybean | cytosol, nucleus, plastid | 22.4 | 7.89 |
| PGSC0003DMT400009682 | Potato | plastid | 24.8 | 7.75 |
| VIT_18s0001g14110.t01 | Wine grape | nucleus | 27.2 | 7.57 |
| HORVU5Hr1G040190.4 | Barley | plastid | 28.0 | 7.25 |
| HORVU0Hr1G038470.7 | Barley | mitochondrion, plastid | 26.4 | 7.21 |
| HORVU2Hr1G073750.2 | Barley | plastid | 24.8 | 5.61 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G004820.2 | EnsemblPlantsGene:HORVU2Hr1G004820 | InterPro:E2F | PANTHER:PTHR12081 | PANTHER:PTHR12081:SF49 | UniParc:UPI0002954BDE |
| UniProt:M0YB42 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:10947709..10948702
Molecular Weight (calculated)
13595.5 Da
IEP (calculated)
4.025
GRAVY (calculated)
-0.674
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MDICKDLESQ EKHYRLLLRS SMGPIDCYLL SDHQEVSNPE QVAQDNLDHA SAAGGSDAPR PVDGHPSQAP EKGEGDTIGK DTSEPSSTHE LMSGILRIVP
101: PDTDIDADYW LASDVDATMT ETWAT
101: PDTDIDADYW LASDVDATMT ETWAT
001: MSEEVPQQFP SSKRQLHPSL SSMKPPLVAP GEYHRFDAAE TRGGGAVADQ VVSDAIVIKS TLKRKTDLVN QIVEVNELNT GVLQTPVSGK GGKAKKTSRS
101: AKSNKSGTLA SGSNAGSPGN NFAQAGTCRY DSSLGLLTKK FINLIKQAED GILDLNKAAD TLEVQKRRIY DITNVLEGIG LIEKTLKNRI QWKGLDVSKP
201: GETIESIANL QDEVQNLAAE EARLDDQIRE SQERLTSLSE DENNKRLLFV TENDIKNLPC FQNKTLIAVK APHGTTLEVP DPDEAGGYQR RYRIILRSTM
301: GPIDVYLVSQ FEESFEDIPQ ADEPSNVPDE PSNVPDVPSN LPSTSGLPEN HDVSMPMKEE STERNMETQE VDDTQRVYSD IESHDFVDGI MKIVPPDLDM
401: GVDYWFRSEV GEVSITDMWP DEYWNQMITF DQDHAGPSDN KILEQPQTPS SPTPEESTAT RSPTGS
101: AKSNKSGTLA SGSNAGSPGN NFAQAGTCRY DSSLGLLTKK FINLIKQAED GILDLNKAAD TLEVQKRRIY DITNVLEGIG LIEKTLKNRI QWKGLDVSKP
201: GETIESIANL QDEVQNLAAE EARLDDQIRE SQERLTSLSE DENNKRLLFV TENDIKNLPC FQNKTLIAVK APHGTTLEVP DPDEAGGYQR RYRIILRSTM
301: GPIDVYLVSQ FEESFEDIPQ ADEPSNVPDE PSNVPDVPSN LPSTSGLPEN HDVSMPMKEE STERNMETQE VDDTQRVYSD IESHDFVDGI MKIVPPDLDM
401: GVDYWFRSEV GEVSITDMWP DEYWNQMITF DQDHAGPSDN KILEQPQTPS SPTPEESTAT RSPTGS
Arabidopsis Description
E2FBTranscription factor E2FB [Source:UniProtKB/Swiss-Prot;Acc:Q9FV71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.