Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G031400.1 | Wheat | plastid | 81.64 | 80.39 |
| HORVU2Hr1G004820.2 | Barley | cytosol | 21.68 | 78.4 |
| TraesCS2B01G043500.1 | Wheat | plastid | 78.32 | 76.62 |
| Os04t0112200-00 | Rice | nucleus, plastid | 53.32 | 50.21 |
| EES11756 | Sorghum | plastid | 47.57 | 43.88 |
| Zm00001d004512_P001 | Maize | plastid | 45.13 | 43.59 |
| CDY17797 | Canola | nucleus | 29.65 | 35.54 |
| CDY16998 | Canola | nucleus | 28.76 | 35.42 |
| Bra014096.1-P | Field mustard | nucleus | 28.76 | 35.42 |
| GSMUA_Achr4P17950_001 | Banana | nucleus | 31.64 | 35.4 |
| KRH61047 | Soybean | cytosol, nucleus, plastid | 27.21 | 34.65 |
| AT1G47870.1 | Thale cress | nucleus, plastid | 28.98 | 33.08 |
| KRH51709 | Soybean | nucleus | 30.31 | 32.16 |
| TraesCS6A01G195500.2 | Wheat | mitochondrion, plastid | 32.3 | 31.88 |
| PGSC0003DMT400009682 | Potato | plastid | 27.43 | 31.0 |
| TraesCS5A01G125900.3 | Wheat | cytosol | 30.31 | 30.86 |
| Solyc04g081350.2.1 | Tomato | plastid | 26.77 | 30.48 |
| VIT_18s0001g14110.t01 | Wine grape | nucleus | 29.2 | 29.4 |
| TraesCS2A01G297400.1 | Wheat | nucleus | 28.54 | 28.17 |
| KRH07603 | Soybean | cytosol | 10.62 | 25.4 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:13.1.2.2 | MapMan:15.5.10 | InterPro:E2F | InterPro:E2F-DP_heterodim | InterPro:E2F_CC-MB |
| InterPro:E2F_WHTH_DNA-bd_dom | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR036388 | PFAM:PF02319 |
| PFAM:PF16421 | PANTHER:PTHR12081 | PANTHER:PTHR12081:SF49 | SMART:SM01372 | SUPFAM:SSF144074 | SUPFAM:SSF46785 |
| EnsemblPlantsGene:TraesCS2A01G031800 | EnsemblPlants:TraesCS2A01G031800.1 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | TIGR:cd14660 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:14676627..14680538
Molecular Weight (calculated)
49536.7 Da
IEP (calculated)
6.514
GRAVY (calculated)
-0.697
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSPSLPLP LPRPRPAHRP PLPPQVFLRC PAPPHVHYFR APSPIPVYSP RLPGPRYIAA RPPTPPPPAP AAAAAAPPRP PQASPAQLPP PRPPQPVYEN
101: VVPPARRRGR PKSKAPETEQ KIVIENAQSE VGKGEISQGH HKESTTGPAK GIKRARKPHG SIEGDAANNC RYDSSLGLLT KKFINLLKGA EDGTLDLNKA
201: VEILEVQKRR IYDITNVLEG VDLIEKGLKN TIRWKGFDML LPKEVELQTS ALKEELDSSH EEECRLDEEI REAQEKLLAL KLNKDKKKWL YLSKEDISKI
301: PHLQGSTRIA IHAPHGTCVE VPDPNADMDI CKDLESQEKH YQLLLRSSMG PIDCFLISDH QGVSDPEQVA QDNFDHASTA GGSGAPRPAD DHPSQAPEKG
401: EGDTVGKHTS EPSSTHEPMS GILKIVLPDT DPDADYWLAS DVDATMTETW AT
101: VVPPARRRGR PKSKAPETEQ KIVIENAQSE VGKGEISQGH HKESTTGPAK GIKRARKPHG SIEGDAANNC RYDSSLGLLT KKFINLLKGA EDGTLDLNKA
201: VEILEVQKRR IYDITNVLEG VDLIEKGLKN TIRWKGFDML LPKEVELQTS ALKEELDSSH EEECRLDEEI REAQEKLLAL KLNKDKKKWL YLSKEDISKI
301: PHLQGSTRIA IHAPHGTCVE VPDPNADMDI CKDLESQEKH YQLLLRSSMG PIDCFLISDH QGVSDPEQVA QDNFDHASTA GGSGAPRPAD DHPSQAPEKG
401: EGDTVGKHTS EPSSTHEPMS GILKIVLPDT DPDADYWLAS DVDATMTETW AT
001: MAATSNSGED PTLSYHHRSP FRFELLQSIS SSDPRYSSLT PSSTNRPFSV SQSLPNSQLS PLISPHWDDS YSQITQKVQK SRKNHRIQLG SIANMSGGES
101: IDIAKVIVKQ ESSPQNVKRV YNKSKGGTKL LKAGKRMANG EVQNGGLNGA SINCRYDSSL GLLTKKFVKL IQEAEDGTLD LNYCAVVLEV QKRRIYDITN
201: VLEGIGLIEK TTKNHIRWKG ADNLGQKDLG DQISRLKSEV ESMQSEESRL DDLIRERQEA LRSLEEDDYC RRYMFMTEED ITSLPRFQNQ TLLAIKAPTA
301: SYIEVPDPDE MSFPQQYRMV IRSRMGPIDV YLLSKYKGDS AETSDKLGNE SDQKAPVGVD TPSLKIVTSD TDLKADYWFE SDAEVSLTDL WSNFNS
101: IDIAKVIVKQ ESSPQNVKRV YNKSKGGTKL LKAGKRMANG EVQNGGLNGA SINCRYDSSL GLLTKKFVKL IQEAEDGTLD LNYCAVVLEV QKRRIYDITN
201: VLEGIGLIEK TTKNHIRWKG ADNLGQKDLG DQISRLKSEV ESMQSEESRL DDLIRERQEA LRSLEEDDYC RRYMFMTEED ITSLPRFQNQ TLLAIKAPTA
301: SYIEVPDPDE MSFPQQYRMV IRSRMGPIDV YLLSKYKGDS AETSDKLGNE SDQKAPVGVD TPSLKIVTSD TDLKADYWFE SDAEVSLTDL WSNFNS
Arabidopsis Description
E2FCE2FC [Source:UniProtKB/TrEMBL;Acc:A0A178WB46]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.