Factsheet for TraesCS2B01G333700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G313500.1	Wheat	plastid	93.37	98.56
TraesCS2A01G315300.1	Wheat	plastid	93.18	98.35
HORVU2Hr1G078560.1	Barley	plastid	90.64	95.68
Os04t0447400-01	Rice	plasma membrane	85.58	90.7
EES12248	Sorghum	plastid	85.58	89.96
Zm00001d003531_P002	Maize	plastid	84.02	88.14
GSMUA_Achr8P22810_001	Banana	cytosol	74.66	80.8
TraesCS4B01G052300.1	Wheat	cytosol	76.41	79.19
AT3G17760.1	Thale cress	cytosol	73.29	76.11
TraesCS3B01G022900.1	Wheat	cytosol	72.32	75.71
Bra022241.1-P	Field mustard	cytosol	72.12	75.51
Bra021272.1-P	Field mustard	cytosol	72.32	75.41
KRH38971	Soybean	cytosol	73.1	75.3
TraesCS4B01G231400.1	Wheat	cytosol	73.29	75.2
VIT_17s0000g00920.t01	Wine grape	cytosol	73.88	75.05
KRH09492	Soybean	cytosol	72.9	74.95
GSMUA_Achr7P02370_001	Banana	cytosol	72.9	74.95
Solyc03g098240.2.1	Tomato	plastid	73.1	74.7
PGSC0003DMT400079706	Potato	cytosol	72.9	74.5
TraesCS3B01G583600.1	Wheat	cytosol, plastid	71.34	73.05
TraesCS2B01G334000.1	Wheat	cytosol	67.25	69.14
AT3G17720.1	Thale cress	mitochondrion	25.15	66.49
CDX87977	Canola	cytosol	27.88	62.72
TraesCS3B01G100600.1	Wheat	golgi	18.71	17.81

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF1	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS2B01G333700	EnsemblPlants:TraesCS2B01G333700.1

Description

No Description!

Coordinates

chr2B:-:477527614..477529899

Molecular Weight (calculated)

58431.4 Da

IEP (calculated)

6.633

GRAVY (calculated)

-0.195

Length

513 amino acids

Sequence
(BLAST)

001: MALSRAQTSS GESLISSTFA SRYVRTALPR FRMPEQSIPK DAAYQIINDE LMLDGNPRLN LASFVTTWME PECDKLIQDS VNKNYVDMDE YPVTTEFQVS
101: IISFLMQFLR DYGRRRMLLF VDLKQNRCVN MIAHLFNAPI GEDETAVGVG TVGSSEAIML AGLAFKRKWQ NKMKAEGKPH DKPNIVTGAN VQVCWEKFAR
201: YFEVELKEVK LREGYYVMDP EKAVELVDEN TICVAAILGS TLNGEFEDVK MLNDLLVAKN AETGWDTPIH VDAASGGFIA PFIYPELEWD FRLPLVKSIN
301: VSGHKYGLVY AGVGWVIWRN KEDLPDELIF HINYLGADQP TFTLNFSKGS SQIIAQYYQL IRLGFEGYKD IMQNCRDNAT VLREGVEKMG YFHLVSKDSG
401: VPLVAFSLKD SSKYTVFEVV ESLRRFGWIV PAYTMPADAE HIAVMRVVIR EDFSRGLAER LITDLKKVMV EMDAHAKKHG HHEHVKKTAH QIEKEVTTYW
501: RTFVARKKHS LVC

Best Arabidopsis Sequence Match ( AT2G02010.1 )
(BLAST)

001: MVLSKTVSES DVSIHSTFAS RYVRNSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.