Factsheet for Zm00001d003531_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12248	Sorghum	plastid	96.73	96.93
HORVU2Hr1G078560.1	Barley	plastid	89.37	89.92
Os04t0447400-01	Rice	plasma membrane	88.75	89.67
TraesCS2D01G313500.1	Wheat	plastid	88.34	88.89
TraesCS2A01G315300.1	Wheat	plastid	87.93	88.48
TraesCS2B01G333700.1	Wheat	plastid	88.14	84.02
GSMUA_Achr8P22810_001	Banana	cytosol	78.73	81.22
Zm00001d033805_P001	Maize	cytosol, extracellular	79.14	78.5
Solyc03g098240.2.1	Tomato	plastid	79.55	77.49
PGSC0003DMT400079706	Potato	cytosol	79.35	77.29
Zm00001d047981_P001	Maize	cytosol	77.3	77.14
GSMUA_Achr7P02370_001	Banana	cytosol	78.12	76.55
KRH09492	Soybean	cytosol	77.71	76.15
KRH38971	Soybean	cytosol	77.3	75.9
AT3G17760.1	Thale cress	cytosol	75.66	74.9
VIT_17s0000g00920.t01	Wine grape	cytosol	77.3	74.85
Bra022241.1-P	Field mustard	cytosol	74.85	74.69
Bra021272.1-P	Field mustard	cytosol	74.44	73.98
AT3G17720.1	Thale cress	mitochondrion	26.58	67.01
CDX87977	Canola	cytosol	29.65	63.6
Zm00001d003522_P002	Maize	cytosol	64.83	62.4
Zm00001d031749_P005	Maize	cytosol	64.62	60.42
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	20.04	17.79

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	EntrezGene:100284551	Gene3D:3.40.640.10
Gene3D:3.90.1150.160	MapMan:4.1.1.1.3.1	UniProt:B6TV07	EMBL:EU968822	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
ProteinID:ONM17117.1	ProteinID:ONM17119.1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF1	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000182D839	EnsemblPlantsGene:Zm00001d003531
EnsemblPlants:Zm00001d003531_P002	EnsemblPlants:Zm00001d003531_T002	SEG:seg	:	:	:

Description

Glutamate decarboxylase

Coordinates

chr2:+:46841603..46844075

Molecular Weight (calculated)

54807.6 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.210

Length

489 amino acids

Sequence
(BLAST)

001: MALSTTNTNA AESQLHCSTF ASRYVRTALP RFKIPEQSIP KEAAYQIIND ELMLDGNPRL NLASFVTTWM EPECDKLIQS SINKNYVDMD EYPVTTELQN
101: RCVNMIAHLF NAPIGDDETA VGVGTVGSSE AIMLAGLAFK RKWQNKMKAA GKPYDKPNIV TGANVQVCWE KFARYFEVEL KEVKLKEGYY VMDPEKAAEM
201: VDENTICVAA ILGSTLNGEF EDVKLLSDLL TAKNAETGWD TPIHVDAASG GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGVGWV IWRSKEDLPD
301: ELIFHINYLG ADQPTFTLNF SKGSSQIIAQ YYQLIRLGFE GYKDVMQNCR DNAAVLREGI NKMGYFDVVS KDSGVPLVAF SLKDSSKYTV FEVAESLRRF
401: GWIVPAYTMP ADAEHVAVMR VVIREDFSRG LAERLIADLG KTMADMDAHA GRKQAPEQPK KSVHDIEKEV TTFWRRLVAN SKKKSSMVC

Best Arabidopsis Sequence Match ( AT2G02010.2 )
(BLAST)

001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.