Factsheet for Zm00001d031749_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	64.24	67.61
TraesCS3A01G022600.3	Wheat	cytosol	62.52	66.73
TraesCS3B01G022900.1	Wheat	cytosol	62.52	66.73
TraesCS3D01G023900.1	Wheat	cytosol	62.33	66.53
HORVU3Hr1G003050.7	Barley	cytosol	61.95	66.12
Zm00001d003531_P002	Maize	plastid	60.42	64.62
Zm00001d033805_P001	Maize	cytosol, extracellular	60.8	64.5
Zm00001d047981_P001	Maize	cytosol	60.04	64.08
TraesCS3D01G523200.1	Wheat	cytosol, plastid	61.19	63.87
TraesCS3A01G515300.1	Wheat	cytosol, plastid	60.99	63.67
HORVU3Hr1G112860.1	Barley	cytosol	60.23	63.38
TraesCS3B01G583600.1	Wheat	cytosol, plastid	60.61	63.27
OQU80616	Sorghum	plastid	66.92	58.53
Zm00001d003522_P002	Maize	cytosol	51.82	53.35
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	15.3	14.52

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	EntrezGene:100284394	EntrezGene:100501579
Gene3D:3.40.640.10	MapMan:4.1.1.1.3.1	UniProt:A0A1D6KL56	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351
GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
ProteinID:ONM03619.1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000843E37C	EnsemblPlantsGene:Zm00001d031749	EnsemblPlants:Zm00001d031749_P005
EnsemblPlants:Zm00001d031749_T005	SEG:seg	:	:	:	:

Description

Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Coordinates

chr1:-:200686356..200689860

Molecular Weight (calculated)

58739.9 Da

IEP (calculated)

8.127

GRAVY (calculated)

-0.268

Length

523 amino acids

Sequence
(BLAST)

001: MVVSVAATGP GTDAEPVSST FFASRYVRDP LPRYRMPERS IPREAAQQII SDELMLDGNP RLNLASFVTT WMEPECDKLI MDSINKNYVD MDEYPVTTEL
101: QNRCVNMIAH LFNAPIKEDE TAIGVGTVGS SEAIMLAGLA FKRKWQNKRK EQGKPCDRPN IVTGANVQVC WEKFARYFEV ELKEVKLSEG YYVMDPVKAV
201: EMVDENTICV AAILGSTLTG EFEDVKQLND LLTEKNKETG WDVPIHVDAA SGGFIAPFLY PELEWDFRLP LVKSINVSGH KYGLVYPGVG WVIWRSKDDL
301: PEELIFHINY LGTDQPTFTL NFSKGSCQII AQYYQLIRLG FEVLLFFDRF FLLLIEHSEY ICAGEQKGVL SDTFLEGESF LFLFSLCAAV TASQSGRVFF
401: FWCRFYLVCR GTETSWRTAR RTRRYCGRAS RRRAGSTSCP RTPGCRWWPS RSGTAAGSAC STSPRTCGGS AGSCRRTRCR PTRSTWRCSE SSSGRTSAAA
501: SPNGWSRTSA RSCASWTRAR PTP

Best Arabidopsis Sequence Match ( AT2G02010.1 )
(BLAST)

001: MVLSKTVSES DVSIHSTFAS RYVRNSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.