CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	72.41	87.12
TraesCS3A01G022600.3	Wheat	cytosol	69.9	85.31
TraesCS3D01G023900.1	Wheat	cytosol	69.73	85.1
TraesCS3B01G022900.1	Wheat	cytosol	69.4	84.69
HORVU3Hr1G003050.7	Barley	cytosol	68.23	83.27
EER93555	Sorghum	cytosol	66.89	81.14
TraesCS3D01G523200.1	Wheat	cytosol, plastid	67.56	80.64
HORVU3Hr1G112860.1	Barley	cytosol	66.89	80.48
TraesCS3A01G515300.1	Wheat	cytosol, plastid	67.06	80.04
TraesCS3B01G583600.1	Wheat	cytosol, plastid	66.89	79.84
EES12248	Sorghum	plastid	64.72	79.3
EER95206	Sorghum	cytosol	64.38	78.57
EES10890	Sorghum	cytosol	58.53	68.9
Zm00001d031749_P005	Maize	cytosol	58.53	66.92
EES02668	Sorghum	cytosol	15.89	17.82

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	UniProt:A0A1Z5RB58	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488
GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831
GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421	EnsemblPlants:OQU80616	ProteinID:OQU80616
ProteinID:OQU80616.1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	EnsemblPlantsGene:SORBI_3007G152800	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000B8BADD6	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:58528825..58534272

Molecular Weight (calculated)

66310.2 Da

IEP (calculated)

6.338

GRAVY (calculated)

-0.186

Length

598 amino acids

Sequence
(BLAST)

001: MVVSVAATGP GTDAEPVSST TFASRYVRDP LPRSVSQPVP FLPAFGSGSS VSSPPRTPLV GHETHTTASI PLLVAVALTN HQHPPQKGEN ESGHKRAAMV
101: LSHASSSRDD DAVASTFASR YVRERLPRYR MPERSIPREA AYQIISDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSVN KNYVDMDEYP VTTELQNRCV
201: NMIAHLFNAP IKEEETAIGV GTVGSSEAIM LAGLAFKRKW QNKRKEQGKP CDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEGYYVMD PVKAVEMVDE
301: NTICVAAILG STLTGEFEDV KLLNDLLTKK NKETGWDVPI HVDAASGGFI APFLYPELEW DFRLPLVKSI NVSGHKYGLV YAGVGWVIWR SKEDLPEELI
401: FHINYLGTDQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NIMENCQENA AILREGIAAT GRFDVLSKDT GVPLVAFSLK DSSRFSVFDI SENLRRFSWI
501: VPAYTMPADA EHVAVLRVVI REDFSRSLCE RLVSDIKKIL HELDARATHA VTWVSTAAAA AVQADDGAVV GKKSALEIER EVAARWRNAV NKKKTGVC

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.