CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	94.75	91.65
Os01t0100900-01	Rice	nucleus	87.05	86.09
TraesCS3B01G100600.1	Wheat	golgi	86.68	85.71
TraesCS3D01G085400.1	Wheat	plasma membrane	86.49	85.53
TraesCS3A01G085400.2	Wheat	plasma membrane	86.49	83.21
HORVU3Hr1G015150.11	Barley	cytosol	79.36	78.48
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	75.61	75.19
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	75.05	74.49
KRH01552	Soybean	plastid, vacuole	72.05	71.78
KRH70554	Soybean	endoplasmic reticulum	71.86	71.46
Solyc05g015860.2.1	Tomato	plastid	70.17	69.52
CDY11756	Canola	plastid	70.17	68.75
Bra010909.1-P	Field mustard	plastid	69.42	68.01
CDX90118	Canola	plastid	69.42	68.01
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	69.42	68.01
KRH25771	Soybean	cytosol	14.45	66.38
PGSC0003DMT400051021	Potato	plastid	67.73	66.12
Bra032860.1-P	Field mustard	cytosol	8.07	60.56
CDY48414	Canola	cytosol	24.95	57.33
CDY48416	Canola	cytosol	24.95	57.33
EER95206	Sorghum	cytosol	18.39	20.0
EES12248	Sorghum	plastid	18.2	19.88
EER93555	Sorghum	cytosol	18.2	19.68
EES10890	Sorghum	cytosol	18.39	19.29
OQU80616	Sorghum	plastid	17.82	15.89

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:5.7.5.3	EntrezGene:8072381	UniProt:C5XFN1	EnsemblPlants:EES02668
ProteinID:EES02668	ProteinID:EES02668.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016829	GO:GO:0016831
GO:GO:0019752	GO:GO:0030149	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00282
PANTHER:PTHR42735	PANTHER:PTHR42735:SF6	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase
EnsemblPlantsGene:SORBI_3003G109100	SUPFAM:SSF53383	unigene:Sbi.1148	UniParc:UPI0001A84DAB	RefSeq:XP_002457548.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:9835489..9842152

Molecular Weight (calculated)

57229.6 Da

IEP (calculated)

7.581

GRAVY (calculated)

0.054

Length

533 amino acids

Sequence
(BLAST)

001: MEAAAEMALR LRAAANDRLA GYEPLALVAA PLLALLVART LHAAANAVAD RGLVAIAIAA VKLLPGVSGY IAAEKKKVVD KMQSGGAKND RRADLPTIGL
101: GEQVIEELET LKAKDVDWQG KCSGTVYIAG SESEGHFELI NKAVSMFSHT NPLHQDVFKS VANMEAEVVA MTAALLGSKE KSSGGQICGN MTSGGTESIL
201: LAVKTTRDYM RSKKGITKPE IIMAESAHSA YDKAAEYFNI KVRRVPVNKE FLADVKGFKR CINGNTIMMI GSAPGFPHGL IDPIEELGEL ASRYDICLHI
301: DLCLGGFVLP FARKLGYPIP PFDFSVKGVT SISSDVHKYG LAPKGTSIVL YRNHEIRKHQ FVAVTEWTGG LYVSPTMAGS RPGGLIAGAW AAMMSLGLNG
401: YLDNTRCVME VSKKIQRGIG EIPGLFVIGK PDMTIVAFGS DVVDIFEVND IMSSKGWHLN ALQRPNSLHI CVTLQHTTIY DQFLKDLQDS VDTVKANPGP
501: ISGGMAPIYG AAGKMPDRGT VRELLVEFMD SSC

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.