Factsheet for Bra032860.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48416	Canola	cytosol	49.3	15.09
CDY48414	Canola	cytosol	49.3	15.09
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	77.46	10.11
Bra010909.1-P	Field mustard	plastid	76.06	9.93
KRH01552	Soybean	plastid, vacuole	71.83	9.53
KRH70554	Soybean	endoplasmic reticulum	71.83	9.51
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	71.83	9.5
Solyc05g015860.2.1	Tomato	plastid	69.01	9.11
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	66.2	8.77
KRH25771	Soybean	cytosol	14.08	8.62
TraesCS3D01G085400.1	Wheat	plasma membrane	64.79	8.53
Os01t0100900-01	Rice	nucleus	64.79	8.53
HORVU3Hr1G015150.11	Barley	cytosol	64.79	8.53
TraesCS3B01G100600.1	Wheat	golgi	63.38	8.35
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	64.79	8.35
TraesCS3A01G085400.2	Wheat	plasma membrane	64.79	8.3
EES02668	Sorghum	cytosol	60.56	8.07
PGSC0003DMT400051021	Potato	plastid	47.89	6.23
Bra004137.1-P	Field mustard	cytosol	21.13	3.83
Bra008561.1-P	Field mustard	cytosol	21.13	3.18
Bra023612.1-P	Field mustard	cytosol	21.13	3.18
Bra026621.1-P	Field mustard	cytosol	21.13	3.04
Bra017429.1-P	Field mustard	cytosol	21.13	3.04
Bra021090.1-P	Field mustard	cytosol	21.13	3.04
Bra006396.1-P	Field mustard	cytosol, plastid	21.13	3.02
Bra006397.1-P	Field mustard	cytosol	21.13	2.99
Bra022241.1-P	Field mustard	cytosol	19.72	2.86
Bra021272.1-P	Field mustard	cytosol	19.72	2.85
Bra006404.1-P	Field mustard	cytosol	0.0	0.0
Bra006399.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Bra032860.1	EnsemblPlants:Bra032860.1-P	EnsemblPlantsGene:Bra032860	GO:GO:0003674	GO:GO:0003824	InterPro:PyrdxlP-dep_Trfase
PANTHER:PTHR42735	PANTHER:PTHR42735:SF6	SUPFAM:SSF53383	UniParc:UPI0002542528	UniProt:M4EVM7	MapMan:35.1

Description

AT1G27980 (E=1e-010) DPL1, ATDPL1 | DPL1; carboxy-lyase/ catalytic/ pyridoxal phosphate binding

Coordinates

chrA09:-:12350520..12350930

Molecular Weight (calculated)

8074.8 Da

IEP (calculated)

9.063

GRAVY (calculated)

-0.156

Length

71 amino acids

Sequence
(BLAST)

1: MTSGGTESIV LTVKSSRDYM KYKNGITRPE MYLLRRHVNR NTIMIVGSAP GFPHGIIYPV EVDFVSDYCN F

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.