Factsheet for Os01t0100900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02668	Sorghum	cytosol	86.09	87.05
TraesCS3D01G085400.1	Wheat	plasma membrane	86.64	86.64
TraesCS3B01G100600.1	Wheat	golgi	86.64	86.64
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	86.83	84.94
TraesCS3A01G085400.2	Wheat	plasma membrane	87.01	84.66
HORVU3Hr1G015150.11	Barley	cytosol	79.41	79.41
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	75.14	75.42
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	74.77	75.19
KRH01552	Soybean	plastid, vacuole	72.54	73.08
KRH70554	Soybean	endoplasmic reticulum	71.99	72.39
Solyc05g015860.2.1	Tomato	plastid	71.43	71.56
Bra010909.1-P	Field mustard	plastid	70.5	69.85
CDY11756	Canola	plastid	70.5	69.85
CDX90118	Canola	plastid	70.5	69.85
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	69.39	68.75
PGSC0003DMT400051021	Potato	plastid	68.65	67.77
KRH25771	Soybean	cytosol	14.29	66.38
Bra032860.1-P	Field mustard	cytosol	8.53	64.79
CDY48416	Canola	cytosol	25.23	58.62
CDY48414	Canola	cytosol	25.23	58.62
Os03t0236200-01	Rice	plasma membrane	18.18	19.92
Os03t0720300-01	Rice	plastid	18.18	19.92
Os04t0447400-01	Rice	plasma membrane	17.44	19.42
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	17.63	19.11
Os04t0447800-01	Rice	cytosol, plasma membrane	17.63	19.0
Os05t0421750-00	Rice	mitochondrion	5.57	11.49

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4326459	MapMan:5.7.5.3	EMBL:AK243573	EMBL:AY972084
ProteinID:BAB62623.1	ProteinID:BAD45497.1	ProteinID:BAF03654.2	ProteinID:BAS69918.1	ProteinID:EEE53694.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0006629	GO:GO:0006665	GO:GO:0008117	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016829
GO:GO:0016831	GO:GO:0019752	GO:GO:0030149	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
EnsemblPlantsGene:Os01g0100900	EnsemblPlants:Os01t0100900-01	PFAM:PF00282	PANTHER:PTHR42735	PANTHER:PTHR42735:SF6	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	UniProt:Q52RG7	SUPFAM:SSF53383	UniParc:UPI000050984F
RefSeq:XP_015621818.1	SEG:seg	:	:	:	:

Description

SPHINGOSINE-1-PHOSPHATE LYASE 1, Sphingosine-1-Phoshpate Lyase 1Sphingosine-1-phosphate lyase, Disease resistance response (Os01t0100900-01)

Coordinates

chr1:+:35623..41136

Molecular Weight (calculated)

58274.9 Da

IEP (calculated)

8.376

GRAVY (calculated)

0.055

Length

539 amino acids

Sequence
(BLAST)

001: MELAMDFALR LRDAANHHLS RYEPLVLLAA PLLALLAART LHAAAAAVAD RGLRTVLLAL AMTAIKLLPG VSAYINAEKR KVVDQLQSGG TSTKSTLRTE
101: LPTVGLSNQV INDLETLKAR DVNWQGKCSG TVYIAGSESE GHFALINKAY SMFSHTNPLH QDVFKSVAQL EAEVVAMTAA LLGIKEKSSG GQICGNMTSG
201: GTESILLAVK TSRDYMRTKK GITKPEMIIA ESAHSAYDKA AQYFNIKVRR VPVNKEFLAD VKGFKRCING NTIMMVGSAP GFPHGLIDPI EELGELASRY
301: DICLHVDLCL GGFVLPFARK LGYPIPPFDF CVKGVTSIST DVHKYGLAPK GTSIVLYKNH EIRKHQFVAV TEWTGGLYVS PTIAGSRPGG LIAGAWAAMT
401: SLGLNGYMEN TGHIMEVSKK IQRGIEDIPG LFVIGKPDMT VVAFGSDSVD IFEVNDIMSS KGWHLNALQR PNSLHICVTL QHTVIYEEFL KDLKDSVDTV
501: KANPGPISGG RAPIYGAAGK MPDRGMVREL LVEFMDASC

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.