CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
endoplasmic reticulum 3
extracellular 2
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70554	Soybean	endoplasmic reticulum	97.01	96.83
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	83.55	83.24
KRH25771	Soybean	cytosol	17.57	81.03
CDY11756	Canola	plastid	78.5	77.21
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	78.32	77.02
Solyc05g015860.2.1	Tomato	plastid	77.38	76.95
Bra010909.1-P	Field mustard	plastid	78.13	76.84
CDX90118	Canola	plastid	78.13	76.84
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	73.08	72.95
PGSC0003DMT400051021	Potato	plastid	74.21	72.71
Os01t0100900-01	Rice	nucleus	73.08	72.54
EES02668	Sorghum	cytosol	71.78	72.05
Bra032860.1-P	Field mustard	cytosol	9.53	71.83
TraesCS3B01G100600.1	Wheat	golgi	71.96	71.43
TraesCS3D01G085400.1	Wheat	plasma membrane	71.78	71.24
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	72.34	70.24
TraesCS3A01G085400.2	Wheat	plasma membrane	71.96	69.49
HORVU3Hr1G015150.11	Barley	cytosol	68.6	68.09
CDY48416	Canola	cytosol	27.1	62.5
CDY48414	Canola	cytosol	27.1	62.5
KRH30893	Soybean	endoplasmic reticulum	16.07	21.08
KRH38971	Soybean	cytosol	19.44	20.88
KRH09492	Soybean	cytosol	19.44	20.84
KRH42467	Soybean	nucleus	18.13	19.68
KRH58569	Soybean	cytosol	17.94	19.47
KRH42468	Soybean	cytosol	17.76	19.27
KRH72934	Soybean	cytosol	17.76	18.89
KRH17286	Soybean	cytosol	17.76	18.89
KRG97998	Soybean	endoplasmic reticulum	17.57	18.69
KRH42466	Soybean	cytosol	15.7	17.83

Protein Annotations

EntrezGene:100794395	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:5.7.5.3	EMBL:ACUP02011521	EnsemblPlantsGene:GLYMA_18G284300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	UniProt:I1N505	InterPro:IPR015421
InterPro:IPR015422	EnsemblPlants:KRH01552	ProteinID:KRH01552	ProteinID:KRH01552.1	PFAM:PF00282	PANTHER:PTHR42735
PANTHER:PTHR42735:SF6	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383
UniParc:UPI000233F54B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:56489793..56496952

Molecular Weight (calculated)

58306.7 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.007

Length

535 amino acids

Sequence
(BLAST)

001: MASISHFRTS ANSFLSQYEP LSLLLAPLLS LLFAHALRSF FHLLSQNGLK ATLLGFLINS LKLVPGVKGY IDAEKQKVVD KLQSDGKSKR EGWKTELPST
101: GLGTSVLEKM REEKINDAVW QGKCSGTVYI GGSESDGHFS LINEACSMFA HTNPLHLDVF KSVARFEAEV VAMTAALLGS KEKSSGRQIC GNMTSGGTES
201: ILLAVKSSRD YMKSKKGITR PEMIIPESGH SAYDKAAQYF NIKLWRVPVN KNFQADVKAI RRHINKNTIL IVGSAPGFPH GVIDPIEELG HLASSFGICF
301: HVDLCLGGFV LPFARELGYH IPPFDFSVKG VSSISVDVHK YGLAPKGTSV VLYRNHEIRK HQFVAVTEWS GGLYVSPTIA GSRPGSLIAG AWAAMISLGK
401: EGYLKNTKEI MEGSRRIQQG IEEIAELFIV GKPDMTIVAF GSDVLDIFEV NDVMSSKGWH LNALQRPNSI HICVTLQHVP IVEDFLNDLK ESVKTVKANP
501: GPISGGLAPI YGAAGKMPDR GMVQELLVDY MDGTC

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.