Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11756 | Canola | plastid | 92.65 | 92.65 |
| CDX90118 | Canola | plastid | 92.65 | 92.65 |
| Bra010909.1-P | Field mustard | plastid | 92.65 | 92.65 |
| KRH70554 | Soybean | endoplasmic reticulum | 77.39 | 78.54 |
| KRH01552 | Soybean | plastid, vacuole | 77.02 | 78.32 |
| VIT_01s0010g03940.t01 | Wine grape | cytosol, golgi | 77.21 | 78.21 |
| Bra032860.1-P | Field mustard | cytosol | 10.11 | 77.46 |
| Solyc05g015860.2.1 | Tomato | plastid | 73.53 | 74.35 |
| PGSC0003DMT400051021 | Potato | plastid | 71.14 | 70.88 |
| TraesCS3D01G085400.1 | Wheat | plasma membrane | 70.04 | 70.69 |
| TraesCS3B01G100600.1 | Wheat | golgi | 69.85 | 70.5 |
| GSMUA_Achr6P06370_001 | Banana | golgi, mitochondrion, plasma membrane, vacuole | 69.12 | 70.15 |
| CDY48414 | Canola | cytosol | 29.78 | 69.83 |
| CDY48416 | Canola | cytosol | 29.78 | 69.83 |
| EES02668 | Sorghum | cytosol | 68.01 | 69.42 |
| Os01t0100900-01 | Rice | nucleus | 68.75 | 69.39 |
| KRH25771 | Soybean | cytosol | 14.71 | 68.97 |
| TraesCS3A01G085400.2 | Wheat | plasma membrane | 69.85 | 68.59 |
| Zm00001d008389_P003 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 68.93 | 68.06 |
| HORVU3Hr1G015150.11 | Barley | cytosol | 66.73 | 67.35 |
| AT3G17760.1 | Thale cress | cytosol | 18.38 | 20.24 |
| AT5G17330.1 | Thale cress | cytosol | 18.01 | 19.52 |
| AT1G65960.2 | Thale cress | cytosol | 17.1 | 18.83 |
| AT2G02000.1 | Thale cress | cytosol | 17.1 | 18.6 |
| AT2G02010.2 | Thale cress | plastid | 17.83 | 17.8 |
| AT3G17720.1 | Thale cress | mitochondrion | 5.88 | 16.49 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:5.7.5.3 | EntrezGene:839691 | ProteinID:AAG51494.1 | EMBL:AB175035 |
| ProteinID:AEE30898.1 | EMBL:AF360166 | ArrayExpress:AT1G27980 | EnsemblPlantsGene:AT1G27980 | RefSeq:AT1G27980 | TAIR:AT1G27980 |
| RefSeq:AT1G27980-TAIR-G | EnsemblPlants:AT1G27980.1 | TAIR:AT1G27980.1 | EMBL:AY085442 | EMBL:AY113914 | Symbol:DPL1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0006665 | GO:GO:0008117 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016829 | GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030149 | GO:GO:0030170 | InterPro:IPR015421 |
| InterPro:IPR015422 | RefSeq:NP_174119.1 | PFAM:PF00282 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR42735 | PANTHER:PTHR42735:SF6 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | UniProt:Q9C509 | SUPFAM:SSF53383 |
| TMHMM:TMhelix | UniParc:UPI00000AB053 | SEG:seg | : | : | : |
Description
DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
Coordinates
chr1:+:9748506..9752769
Molecular Weight (calculated)
59481.4 Da
IEP (calculated)
8.084
GRAVY (calculated)
0.025
Length
544 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.