CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01552	Soybean	plastid, vacuole	81.03	17.57
KRH70554	Soybean	endoplasmic reticulum	80.17	17.35
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	75.0	16.2
PGSC0003DMT400051021	Potato	plastid	71.55	15.2
Solyc05g015860.2.1	Tomato	plastid	69.83	15.06
Bra010909.1-P	Field mustard	plastid	68.97	14.71
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	68.97	14.71
CDX90118	Canola	plastid	68.97	14.71
CDY11756	Canola	plastid	68.97	14.71
TraesCS3D01G085400.1	Wheat	plasma membrane	68.1	14.66
TraesCS3B01G100600.1	Wheat	golgi	68.1	14.66
HORVU3Hr1G015150.11	Barley	cytosol	68.1	14.66
EES02668	Sorghum	cytosol	66.38	14.45
Os01t0100900-01	Rice	nucleus	66.38	14.29
TraesCS3A01G085400.2	Wheat	plasma membrane	68.1	14.26
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	67.24	14.16
Bra032860.1-P	Field mustard	cytosol	8.62	14.08
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	64.66	13.99
CDY48416	Canola	cytosol	17.24	8.62
CDY48414	Canola	cytosol	17.24	8.62
KRH72934	Soybean	cytosol	18.97	4.37
KRH17286	Soybean	cytosol	18.97	4.37
KRH42467	Soybean	nucleus	18.1	4.26
KRH38971	Soybean	cytosol	18.1	4.22
KRH09492	Soybean	cytosol	18.1	4.21
KRG97998	Soybean	endoplasmic reticulum	18.1	4.17
KRH30893	Soybean	endoplasmic reticulum	14.66	4.17
KRH42468	Soybean	cytosol	17.24	4.06
KRH58569	Soybean	cytosol	17.24	4.06
KRH42466	Soybean	cytosol	16.38	4.03

Protein Annotations

EMBL:ACUP02007321	EnsemblPlants:KRH25771	EnsemblPlantsGene:GLYMA_12G127800	Gene3D:3.40.640.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR015421	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	PANTHER:PTHR42735	PANTHER:PTHR42735:SF6	ProteinID:KRH25771
ProteinID:KRH25771.1	SUPFAM:SSF53383	UniParc:UPI000295B6D6	UniProt:K7LUG4	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr12:-:13951507..13953765

Molecular Weight (calculated)

12780.4 Da

IEP (calculated)

8.006

GRAVY (calculated)

-0.031

Length

116 amino acids

Sequence
(BLAST)

001: MPKNKSCIGG SESHGHFSLI NEACSMFAHT NPLHLDVFKS VAHFEAEVVA MTAALLGSKE KNSGGQICGN MTPSGTEYII SYQYFNIKLW HVPINKNFQV
101: DVKAIQCHIT KNTILV

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.