Factsheet for Zm00001d008389_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02668	Sorghum	cytosol	91.65	94.75
TraesCS3D01G085400.1	Wheat	plasma membrane	84.94	86.83
Os01t0100900-01	Rice	nucleus	84.94	86.83
TraesCS3B01G100600.1	Wheat	golgi	84.39	86.27
TraesCS3A01G085400.2	Wheat	plasma membrane	84.21	83.75
HORVU3Hr1G015150.11	Barley	cytosol	77.86	79.59
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	73.5	75.56
VIT_01s0010g03940.t01	Wine grape	cytosol, golgi	72.96	74.86
KRH01552	Soybean	plastid, vacuole	70.24	72.34
KRH70554	Soybean	endoplasmic reticulum	70.05	72.01
Solyc05g015860.2.1	Tomato	plastid	68.42	70.07
CDY11756	Canola	plastid	69.15	70.04
Bra010909.1-P	Field mustard	plastid	68.24	69.12
CDX90118	Canola	plastid	68.24	69.12
AT1G27980.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane, plastid	68.06	68.93
KRH25771	Soybean	cytosol	14.16	67.24
PGSC0003DMT400051021	Potato	plastid	66.06	66.67
Bra032860.1-P	Field mustard	cytosol	8.35	64.79
CDY48416	Canola	cytosol	24.86	59.05
CDY48414	Canola	cytosol	24.86	59.05
Zm00001d003531_P002	Maize	plastid	17.79	20.04
Zm00001d047981_P001	Maize	cytosol	17.6	19.8
Zm00001d033805_P001	Maize	cytosol, extracellular	17.06	19.07
Zm00001d003522_P002	Maize	cytosol	16.88	18.31
Zm00001d031749_P005	Maize	cytosol	14.52	15.3

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:5.7.5.3	UniProt:A0A1D6FCD5	ProteinID:AQK89712.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030149	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00282	PANTHER:PTHR42735	PANTHER:PTHR42735:SF6	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	UniParc:UPI0008430DDA	EnsemblPlantsGene:Zm00001d008389
EnsemblPlants:Zm00001d008389_P003	EnsemblPlants:Zm00001d008389_T003	SEG:seg	:	:	:

Description

Sphingosine-1-phosphate lyase

Coordinates

chr8:+:7021994..7027546

Molecular Weight (calculated)

59282.0 Da

IEP (calculated)

8.520

GRAVY (calculated)

0.050

Length

551 amino acids

Sequence
(BLAST)

001: MEAAAELALR LRAAANDRLA RYEPLALVAA PLLALLVART LHATASAVAD RGLVAIAIAA VKSAFPPSFL LDIPYARVCP LLPGVSGYIA AEKKKVVDKM
101: QSGGAKNNRR AELPTIGLAE QVIEELETLK AKDVDWQGKC SGTVYIAGSE SEGHFQLINK AYSMFSHTNP LHQDVFKSVA NMEAEVVAMT AALLGSKEKS
201: SGGQICGNMT SGGTESILLA VKTSRDYMRS KKGITRPEMI IAESAHSAYD KAAQYFNIKV RRVPVNKEFL ADVKGFKRCI NGNTIMMVGS TPGFPHGLID
301: PIEELGELAS RYDICLHVDL CLGGFVLPFA HKLGYPIPPF DFSVKGVTSI SSDVHKYGLA PKGTSIVLYR NHEIRKHQFV AVTEWTGGLY VSPTIAGSRP
401: GGLIAGAWAA MMSLGLNGYL DSTSRIMDVS KKIQRGIGEI PGLFVIGKPD MTVVAFGSDV VDIFEVNDIM SSKGWHLNAL QRPNSLHICV TLQHTTVYDQ
501: FLKDLQDSVN TVKANPGPIS GGKAPIYGAA GKMPDRGTVR ELLVEFMDSS C

Best Arabidopsis Sequence Match ( AT1G27980.1 )
(BLAST)

001: MDSFSYSSMK SMLIQARGSL NSRLSEFEPL VLLLVPLVSL FLAQIIGSVF GVVHEKGLKA CLIGFIMGLL KMIPGVQNYI DAEKQKVVDQ LQSGSSSKKK
101: NKTEVLPVKG LGVEVLEKME NEKRNDAIWQ GKCSGTVYIG GAESEGHFSL INQACSMFAH TNPLHIDVFQ SVVRFESEVV AMTAALLGSK ETASGGQICG
201: NMTSGGTESI VLAVKSSRDY MKYKKGITRP EMIIPESGHS AYDKAAQYFK IKLWRVPVDK DFRADVKATR RHINRNTIMI VGSAPGFPHG IIDPIEELGQ
301: LALSYGICFH VDLCLGGFVL PFARKLGYQI PPFDFSVQGV TSISVDVHKY GLAPKGTSTV LYRNHEIRKH QFVAVTEWSG GLYVSPTIAG SRPGSLVAGA
401: WAAMMSLGEE GYLQNTSKIM EASKRLEEGV REIHELFVIG KPDMTIVAFG SKALDIFEVN DIMSSKGWHL NALQRPNSIH ICITLQHVPV VDDFLRDLRE
501: AVETVKANPG PITGGLAPIY GAAGKMPDRG MVNELLVSFM DSQY

Arabidopsis Description

DPL1Sphingosine-1-phosphate lyase [Source:UniProtKB/Swiss-Prot;Acc:Q9C509]
SUBAcon: [endoplasmic reticulum,golgi,plastid,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.