Factsheet for Zm00001d003522_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10890	Sorghum	cytosol	88.78	88.78
TraesCS2B01G334000.1	Wheat	cytosol	82.48	83.97
TraesCS2D01G313800.1	Wheat	cytosol	82.48	83.97
TraesCS2A01G315800.1	Wheat	cytosol	81.89	83.37
Os04t0447800-01	Rice	cytosol, plasma membrane	80.51	81.8
GSMUA_Achr7P12330_001	Banana	cytosol	72.64	73.36
Zm00001d047981_P001	Maize	cytosol	65.35	67.76
VIT_01s0011g06610.t01	Wine grape	cytosol	67.13	66.73
Zm00001d033805_P001	Maize	cytosol, extracellular	63.98	65.92
HORVU2Hr1G078580.10	Barley	cytosol	69.88	64.9
Zm00001d003531_P002	Maize	plastid	62.4	64.83
Zm00001d031749_P005	Maize	cytosol	53.35	51.82
Zm00001d008389_P003	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	18.31	16.88

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	EntrezGene:100273302	Gene3D:3.40.640.10
Gene3D:3.90.1150.160	MapMan:4.1.1.1.3.1	UniProt:A0A1D6E9M9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351
GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
ProteinID:ONM17100.1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF4	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000842A2FC	EnsemblPlantsGene:Zm00001d003522	EnsemblPlants:Zm00001d003522_P002
EnsemblPlants:Zm00001d003522_T002	SEG:seg	:	:	:	:

Description

Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Coordinates

chr2:-:46610639..46612582

Molecular Weight (calculated)

56658.1 Da

IEP (calculated)

7.366

GRAVY (calculated)

-0.183

Length

508 amino acids

Sequence
(BLAST)

001: MVLTHVHDLD EASAASAVVF ASRYVQDPLP RYELGEKSVS KDAAYQIIHD ELLLDSSPRL NLASFVTTWM EPECDKLILE GINKNYADMD EYPNRCVNII
101: ARLFHAPVGA SEKAVGVGTV GSSEAIMLAG LAFKRRWQNR RRAAGQPCDR PNIVTGANVQ VCWEKFARYF EVELKEVRLR EGCYVMDPDE AVRMVDDNTI
201: CVAAILGSTL TGEFEDVRRL NDLLAANNRR TGWDTPIHVD AASGGFIAPF LYPDLEWDFR LPLVKSINVS GHKYGLVYAG VGWVVWRSKE DLPDELIFHI
301: NYLGADQPTF TLNFSKGTHA RPDHHYPLPS PSCAPVLTSR ILRRGYRNVM ENCMESARTL REGLERTGRF TIISKEQGVP LVAFTFKAKD ETPLAFKLSA
401: ELRRFGWIVP AYTMPANLEH MAVLRVVVRE DFGRPLAERF LSHVRMALEE LDHAAKGGPV PKMRLTIELG PPARGSGEEA SARVVKREAV VPVHRSVSLA
501: GGKTKGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.