Factsheet for TraesCS2D01G313800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G334000.1	Wheat	cytosol	99.0	99.0
TraesCS2A01G315800.1	Wheat	cytosol	98.8	98.8
Os04t0447800-01	Rice	cytosol, plasma membrane	87.17	87.0
EES10890	Sorghum	cytosol	88.18	86.61
Zm00001d003522_P002	Maize	cytosol	83.97	82.48
GSMUA_Achr7P12330_001	Banana	cytosol	77.76	77.14
HORVU2Hr1G078580.10	Barley	cytosol	82.16	74.95
VIT_01s0011g06610.t01	Wine grape	cytosol	72.55	70.84
TraesCS4D01G052500.1	Wheat	plastid	70.14	70.71
TraesCS2D01G313500.1	Wheat	plastid	68.74	70.58
TraesCS3D01G023900.1	Wheat	cytosol	68.34	69.59
TraesCS3D01G523200.1	Wheat	cytosol, plastid	66.93	66.67
TraesCS4D01G232700.1	Wheat	cytosol	68.74	64.96
TraesCS3D01G085400.1	Wheat	plasma membrane	20.04	18.55

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF4	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS2D01G313800	EnsemblPlants:TraesCS2D01G313800.1
TIGR:cd06450	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:403478345..403480573

Molecular Weight (calculated)

55764.1 Da

IEP (calculated)

6.526

GRAVY (calculated)

-0.141

Length

499 amino acids

Sequence
(BLAST)

001: MVLTHVQSDE AAASAAVFAS RYVQEPVPSY ELGEKSISKD AAYQIIHDEL LLDGSPRLNL ASFVTTWMEP ECDRLILEGM NKNYADMDEY PVTTELQNRC
101: VNIIARLFNA PVGAGETAVG VGTVGSSEAI MLAGLAFKRR WQNRRKAEGK PYDRPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGCYVM DPDKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKRLNDLLAA KNKRTRWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVIW RNKEDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQIIAQYY QFLRLGFEGY KNVMENCMES ARTLREGLLR TGRFDVISKE DGVPLVAFTF RGIRDGSLAF KLSANLRRFG
401: WIVPAYTMPA NLEHMTVLRV VVREDFGRPL AERFLSHVRM ALSELDLAAK GPVPKMRLTI ELGPARSAEE EASVRVVKRD AVSGHRSVSL VSGKTKGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.