Factsheet for TraesCS4D01G232700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G231400.1	Wheat	cytosol	93.37	98.6
TraesCS4A01G075600.1	Wheat	cytosol	92.8	98.0
HORVU4Hr1G064790.6	Barley	cytosol	91.1	96.78
EER95206	Sorghum	cytosol	85.04	91.63
Os03t0236200-01	Rice	plasma membrane	84.66	90.85
Zm00001d047981_P001	Maize	cytosol	84.28	90.82
GSMUA_Achr8P30730_001	Banana	cytosol	77.84	86.71
VIT_04s0079g00600.t01	Wine grape	cytosol	78.6	85.04
VIT_01s0011g06600.t01	Wine grape	cytosol	79.55	84.85
TraesCS4D01G052500.1	Wheat	plastid	78.98	84.24
GSMUA_Achr4P31270_001	Banana	cytosol	77.27	83.44
Solyc11g011920.1.1	Tomato	plastid	78.03	81.91
AT5G17330.1	Thale cress	cytosol	77.65	81.67
Solyc05g054050.2.1	Tomato	plastid	76.7	81.49
PGSC0003DMT400034693	Potato	cytosol	77.46	81.47
KRH72934	Soybean	cytosol	76.89	80.72
KRG97998	Soybean	endoplasmic reticulum	76.33	80.12
KRH17286	Soybean	cytosol	76.14	79.92
AT1G65960.2	Thale cress	cytosol	74.24	79.35
KRH30893	Soybean	endoplasmic reticulum	60.98	78.92
AT2G02000.1	Thale cress	cytosol	74.24	78.4
TraesCS2D01G313500.1	Wheat	plastid	71.4	77.57
AT2G02010.2	Thale cress	plastid	76.52	74.13
TraesCS3D01G023900.1	Wheat	cytosol	68.56	73.88
TraesCS3D01G523200.1	Wheat	cytosol, plastid	69.13	72.85
TraesCS2D01G313800.1	Wheat	cytosol	64.96	68.74
CDX70758	Canola	cytosol	13.64	61.02
CDX78746	Canola	cytosol	16.48	56.86
Bra006404.1-P	Field mustard	cytosol	16.48	56.86
CDX78742	Canola	cytosol	8.9	49.47
Bra006399.1-P	Field mustard	cytosol, mitochondrion	8.71	48.42
TraesCS3D01G085400.1	Wheat	plasma membrane	18.56	18.18

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS4D01G232700	EnsemblPlants:TraesCS4D01G232700.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:393635789..393637741

Molecular Weight (calculated)

59627.4 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.252

Length

528 amino acids

Sequence
(BLAST)

001: MVLSRAASDT DVSVHSTFAS RYVRSSLPRY RMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTEFQNRC
101: VNMIAHLFHA PLGESETAVG VGTVGSSEAI MLAGLAFKRR WQNKRKAEGK PFDKPNIITG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEQAVEMVD
201: ENTICVAAIL GSTLNGEFED VKRINDLLEE KNKQTGWETP IHVDAASGGF IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYPGIGWCVW RTKEDLPDEL
301: IFHINYLGSD QPTFTLNFSK GSSQVIAQYY QLIRHGLEVT SLPHRSGQED SFGKGADTIY IHTITQGYRN IMENCQENAM VVKEGLEKTG RFNIVSKDEG
401: VPLVAFSLKD HSRHDEFEIS DMLRRFGWIV PAYTMPADAQ HVTVLRVVIR EEFSRTLAER LVLDIDTVMA QLDALPSKLA PPALLPATLP KTVVVANGHV
501: KKTELETQKS VTEAWKKFVL AKKTNGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.