Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G231400.1 | Wheat | cytosol | 97.8 | 97.8 |
| HORVU4Hr1G064790.6 | Barley | cytosol | 94.4 | 94.97 |
| TraesCS4A01G369200.1 | Wheat | cytosol | 85.2 | 93.83 |
| TraesCS4D01G232700.1 | Wheat | cytosol | 98.0 | 92.8 |
| EER95206 | Sorghum | cytosol | 89.2 | 91.02 |
| Zm00001d047981_P001 | Maize | cytosol | 88.6 | 90.41 |
| Os03t0236200-01 | Rice | plasma membrane | 88.6 | 90.04 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 81.6 | 86.08 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 81.8 | 83.81 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 82.6 | 83.43 |
| TraesCS4A01G262600.1 | Wheat | cytosol | 82.4 | 83.23 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 81.0 | 82.82 |
| Solyc11g011920.1.1 | Tomato | plastid | 81.6 | 81.11 |
| PGSC0003DMT400034693 | Potato | cytosol | 81.0 | 80.68 |
| Solyc05g054050.2.1 | Tomato | plastid | 80.0 | 80.48 |
| AT5G17330.1 | Thale cress | cytosol | 80.8 | 80.48 |
| KRH72934 | Soybean | cytosol | 80.2 | 79.72 |
| KRG97998 | Soybean | endoplasmic reticulum | 79.6 | 79.13 |
| KRH17286 | Soybean | cytosol | 79.4 | 78.93 |
| AT1G65960.2 | Thale cress | cytosol | 77.2 | 78.14 |
| KRH30893 | Soybean | endoplasmic reticulum | 63.6 | 77.94 |
| AT2G02000.1 | Thale cress | cytosol | 77.2 | 77.2 |
| TraesCS2A01G315300.1 | Wheat | plastid | 74.6 | 76.75 |
| TraesCS3A01G022600.3 | Wheat | cytosol | 72.4 | 73.88 |
| AT2G02010.2 | Thale cress | plastid | 79.6 | 73.03 |
| TraesCS3A01G515300.1 | Wheat | cytosol, plastid | 72.6 | 72.46 |
| TraesCS2A01G315800.1 | Wheat | cytosol | 68.6 | 68.74 |
| CDX70758 | Canola | cytosol | 14.2 | 60.17 |
| CDX78746 | Canola | cytosol | 17.2 | 56.21 |
| Bra006404.1-P | Field mustard | cytosol | 17.2 | 56.21 |
| CDX78742 | Canola | cytosol | 9.4 | 49.47 |
| Bra006399.1-P | Field mustard | cytosol, mitochondrion | 9.2 | 48.42 |
| TraesCS3A01G085400.2 | Wheat | plasma membrane | 20.0 | 18.05 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 | GO:GO:0006536 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 |
| InterPro:Glutamate_decarboxylase | InterPro:IPR015421 | PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF9 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | SUPFAM:SSF53383 | TIGRFAMs:TIGR01788 | EnsemblPlantsGene:TraesCS4A01G075600 | EnsemblPlants:TraesCS4A01G075600.1 |
| TIGR:cd06450 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:75213058..75215412
Molecular Weight (calculated)
56567.0 Da
IEP (calculated)
5.879
GRAVY (calculated)
-0.232
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSRAASDT DVSVHSTFAS RYVRSSLPRY RMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMASM NKNYVDMDEY PVTTEFQNRC
101: VNMIAHLFHA PLGESETAVG VGTVGSSEAI MLAGLAFKRR WQNKRRAEGK PFDKPNIITG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEQAVEMVD
201: ENTICVAAIL GSTLNGEFED VKRINDLLEE KNKRTGWETP IHVDAASGGF IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYPGIGWCVW RTKEDLPDEL
301: IFHINYLGSD QPTFTLNFSK GSSQVIGQYY QLIRHGIEGY TKIMENCQEN AMVVKEGLEK TGRFSIVSKD EGVPLVAFSL KDRSRHDEFE ISDMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREEFSRTLA ERLVLDIDTV MAQLDALPSK LAPPALLPAA LPKTVVVANG HVKKTELETQ KSVTEAWKKF VLAKKTNGVC
101: VNMIAHLFHA PLGESETAVG VGTVGSSEAI MLAGLAFKRR WQNKRRAEGK PFDKPNIITG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEQAVEMVD
201: ENTICVAAIL GSTLNGEFED VKRINDLLEE KNKRTGWETP IHVDAASGGF IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYPGIGWCVW RTKEDLPDEL
301: IFHINYLGSD QPTFTLNFSK GSSQVIGQYY QLIRHGIEGY TKIMENCQEN AMVVKEGLEK TGRFSIVSKD EGVPLVAFSL KDRSRHDEFE ISDMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREEFSRTLA ERLVLDIDTV MAQLDALPSK LAPPALLPAA LPKTVVVANG HVKKTELETQ KSVTEAWKKF VLAKKTNGVC
001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC
Arabidopsis Description
GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.