Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006404.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX70758 | Canola | cytosol | 66.01 | 85.59 |
| CDX78742 | Canola | cytosol | 49.02 | 78.95 |
| CDX95824 | Canola | cytosol | 43.79 | 30.32 |
| CDY68511 | Canola | cytosol, mitochondrion | 77.12 | 29.14 |
| CDX78740 | Canola | cytosol | 71.9 | 27.23 |
| CDY12173 | Canola | cytosol | 55.56 | 24.57 |
| Os05t0421750-00 | Rice | mitochondrion | 41.83 | 24.52 |
| CDY16935 | Canola | cytosol | 74.51 | 23.17 |
| CDX85460 | Canola | cytosol | 69.28 | 22.65 |
| CDY02710 | Canola | cytosol | 71.9 | 22.36 |
| CDX78739 | Canola | cytosol, plastid | 69.93 | 21.57 |
| CDY28614 | Canola | cytosol | 54.9 | 21.43 |
| Os03t0236200-01 | Rice | plasma membrane | 58.82 | 18.29 |
| Zm00001d047981_P001 | Maize | cytosol | 57.52 | 17.96 |
| EER95206 | Sorghum | cytosol | 57.52 | 17.96 |
| CDX70751 | Canola | cytosol, plastid | 74.51 | 17.76 |
| Solyc05g054050.2.1 | Tomato | plastid | 56.86 | 17.5 |
| CDY15807 | Canola | cytosol | 56.21 | 17.44 |
| CDY09396 | Canola | cytosol | 56.21 | 17.44 |
| CDY07474 | Canola | cytosol | 56.21 | 17.41 |
| TraesCS4B01G231400.1 | Wheat | cytosol | 56.86 | 17.4 |
| Os03t0720300-01 | Rice | plastid | 55.56 | 17.28 |
| Zm00001d033805_P001 | Maize | cytosol, extracellular | 55.56 | 17.24 |
| EER93555 | Sorghum | cytosol | 55.56 | 17.24 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 54.9 | 17.21 |
| CDY39258 | Canola | cytosol | 55.56 | 17.21 |
| TraesCS4A01G075600.1 | Wheat | cytosol | 56.21 | 17.2 |
| TraesCS4D01G052500.1 | Wheat | plastid | 55.56 | 17.17 |
| TraesCS4A01G262600.1 | Wheat | cytosol | 55.56 | 17.17 |
| TraesCS4B01G052300.1 | Wheat | cytosol | 55.56 | 17.17 |
| HORVU4Hr1G064790.6 | Barley | cytosol | 55.56 | 17.1 |
| Solyc11g011920.1.1 | Tomato | plastid | 56.21 | 17.1 |
| CDY04111 | Canola | cytosol | 54.9 | 17.04 |
| HORVU4Hr1G008700.1 | Barley | cytosol | 54.9 | 16.97 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 54.9 | 16.97 |
| PGSC0003DMT400034693 | Potato | cytosol | 55.56 | 16.93 |
| CDY56295 | Canola | cytosol | 54.25 | 16.8 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 52.94 | 16.56 |
| TraesCS4A01G369200.1 | Wheat | cytosol | 49.02 | 16.52 |
| TraesCS4D01G232700.1 | Wheat | cytosol | 56.86 | 16.48 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 49.67 | 16.03 |
| CDY46883 | Canola | cytosol | 44.44 | 14.08 |
| CDY49834 | Canola | cytosol | 43.14 | 13.66 |
| CDX87975 | Canola | cytosol | 4.58 | 6.86 |
| CDX87977 | Canola | cytosol | 8.5 | 5.7 |
| CDX90118 | Canola | plastid | 12.42 | 3.49 |
| CDY11756 | Canola | plastid | 12.42 | 3.49 |
| CDY12174 | Canola | cytosol | 1.96 | 2.48 |
| CDY71197 | Canola | cytosol | 1.31 | 1.92 |
| CDY48416 | Canola | cytosol | 1.96 | 1.29 |
| CDY48414 | Canola | cytosol | 1.96 | 1.29 |
| CDX92158 | Canola | cytosol | 1.96 | 1.08 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.90.1150.160 | MapMan:35.1 |
| EnsemblPlants:CDX78746 | ProteinID:CDX78746 | ProteinID:CDX78746.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 |
| GO:GO:0005488 | GO:GO:0006536 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0030170 |
| EnsemblPlantsGene:GSBRNA2T00130180001 | InterPro:Glutamate_decarboxylase | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF9 | InterPro:PyrdxlP-dep_Trfase | SUPFAM:SSF53383 |
| UniParc:UPI000253FD81 | : | : | : | : | : |
Description
BnaA03g06580D
Coordinates
chrLK031815:+:2047027..2048574
Molecular Weight (calculated)
17495.2 Da
IEP (calculated)
6.124
GRAVY (calculated)
-0.214
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMLRNGLEK TERFNIVSKD EGVPLVAFSL KDSSSHTEFE ISDMLHRYGW IVPAYTMPPN AQHITVLLVV IREDFSRTLA ERLVIDIEKV MRVLDELPSR
101: VIHKILLGEE NSEADGDNLM VTVKKSDMES RERSSIYGRS LFQTGRRLMV SGN
101: VIHKILLGEE NSEADGDNLM VTVKKSDMES RERSSIYGRS LFQTGRRLMV SGN
001: MLAGLAFKRK WQNKRKAEGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLSEGYYVM DPDKAAEMVD ENTICVAAIL GSTLNGEFED VKRLNDLLVK
101: KNEETGWNTP IHVDAASGGF IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RAAEDLPEEL IFHINYLGAD QPTFTLNFSK GSSQIIAQYY
201: QLIRLGFEGY KNVMENCIEN MVVLKEGIEK TERFNIVSKD QGVPVVAFSL KDHSFHNEFE ISEMLRRFGW IVPAYTMPAD AQHITVLRVV IREDFSRTLA
301: ERLVADISKV LHELDTLPSK ISKKMGIEGI AENVKEKKME KEILMEVIVG WRKFVKERKK MNGVC
101: KNEETGWNTP IHVDAASGGF IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RAAEDLPEEL IFHINYLGAD QPTFTLNFSK GSSQIIAQYY
201: QLIRLGFEGY KNVMENCIEN MVVLKEGIEK TERFNIVSKD QGVPVVAFSL KDHSFHNEFE ISEMLRRFGW IVPAYTMPAD AQHITVLRVV IREDFSRTLA
301: ERLVADISKV LHELDTLPSK ISKKMGIEGI AENVKEKKME KEILMEVIVG WRKFVKERKK MNGVC
Arabidopsis Description
GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.