CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023612.1-P	Field mustard	cytosol	91.45	90.68
CDY02710	Canola	cytosol	95.09	90.45
CDY16935	Canola	cytosol	89.96	85.57
CDX78740	Canola	cytosol	73.08	84.65
CDY68511	Canola	cytosol, mitochondrion	72.44	83.7
AT5G17330.1	Thale cress	cytosol	87.82	81.87
CDX78739	Canola	cytosol, plastid	85.68	80.85
CDX78742	Canola	cytosol	15.6	76.84
VIT_04s0079g00600.t01	Wine grape	cytosol	79.7	76.43
GSMUA_Achr8P30730_001	Banana	cytosol	76.71	75.74
VIT_01s0011g06600.t01	Wine grape	cytosol	79.7	75.35
CDY15807	Canola	cytosol	79.27	75.25
KRH72934	Soybean	cytosol	80.77	75.15
CDY09396	Canola	cytosol	79.06	75.05
CDY12173	Canola	cytosol	54.91	74.28
CDY04111	Canola	cytosol	78.21	74.24
KRH17286	Soybean	cytosol	79.7	74.16
CDY56295	Canola	cytosol	78.21	74.09
GSMUA_Achr4P31270_001	Banana	cytosol	77.14	73.82
KRG97998	Soybean	endoplasmic reticulum	79.06	73.56
CDY07474	Canola	cytosol	77.56	73.48
KRH30893	Soybean	endoplasmic reticulum	63.89	73.28
CDY39258	Canola	cytosol	77.14	73.08
CDY28614	Canola	cytosol	61.11	72.96
CDX70758	Canola	cytosol	18.16	72.03
CDX78746	Canola	cytosol	22.65	69.28
CDY46883	Canola	cytosol	69.23	67.08
CDY49834	Canola	cytosol	68.38	66.25
CDX92158	Canola	cytosol	38.25	64.62
CDX70751	Canola	cytosol, plastid	88.03	64.17
CDX95824	Canola	cytosol	29.49	62.44
CDX87975	Canola	cytosol	13.25	60.78
CDY71197	Canola	cytosol	12.39	55.77
CDX87977	Canola	cytosol	25.64	52.63
CDY12174	Canola	cytosol	13.46	52.07
CDY11756	Canola	plastid	18.59	15.99
CDX90118	Canola	plastid	18.59	15.99
CDY48416	Canola	cytosol	6.41	12.93
CDY48414	Canola	cytosol	6.41	12.93

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:A0A078D8C0	EnsemblPlants:CDX85460	ProteinID:CDX85460	ProteinID:CDX85460.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00143158001	InterPro:Glutamate_decarboxylase
InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	UniParc:UPI0004EDB140	SEG:seg	:	:

Description

BnaA02g03530D

Coordinates

chrLK031842:-:206598..209970

Molecular Weight (calculated)

52988.8 Da

IEP (calculated)

6.952

GRAVY (calculated)

-0.261

Length

468 amino acids

Sequence
(BLAST)

001: MVLSHAASDT DVSHSTFASP YVRTSLPRFK MPGNSIPNEA AYQIMHDELM LDGNSRLNLA SFLTTWMEPE CDKLIMASIN KNYVEKHAYP ITTELQNRCV
101: NMIANLFNAP LGETETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP FNKPNIVTGA NVHEVCWEKF ARTLCVAAIL GSTLNGEFED VKLLNDLLVL
201: KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYEGIGWVVW RTKEDLPEEL IFHVNYLGVD QPTFTLNFSK GSSQVIAQYY
301: QLIRLGHEGY RNVMENCREN MIVLRAVAEP MEGLKKTEKF NIISKDEGVP LVAFSLKDSS SHTEFEISHM LRRYGWIVPA YTMPPNAQHI TVLRVVIRED
401: FSRTFAERLV IDIDKVMREL DELPSRKSEA NGDKLRVTVK KSDMETPREI INDWKKLVPD RKKTNGIC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.