Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70758 | Canola | cytosol | 27.6 | 51.69 |
| Bra022241.1-P | Field mustard | cytosol | 99.55 | 44.9 |
| CDX78746 | Canola | cytosol | 30.32 | 43.79 |
| AT3G17760.1 | Thale cress | cytosol | 95.93 | 42.91 |
| CDY46883 | Canola | cytosol | 92.76 | 42.44 |
| CDY49834 | Canola | cytosol | 91.4 | 41.82 |
| CDX78742 | Canola | cytosol | 17.19 | 40.0 |
| CDY28614 | Canola | cytosol | 64.25 | 36.22 |
| CDX78740 | Canola | cytosol | 64.25 | 35.15 |
| CDY68511 | Canola | cytosol, mitochondrion | 63.8 | 34.81 |
| CDY12173 | Canola | cytosol | 51.58 | 32.95 |
| KRH38971 | Soybean | cytosol | 71.95 | 31.93 |
| KRH09492 | Soybean | cytosol | 71.49 | 31.66 |
| VIT_17s0000g00920.t01 | Wine grape | cytosol | 69.23 | 30.3 |
| CDY09396 | Canola | cytosol | 66.06 | 29.61 |
| CDY39258 | Canola | cytosol | 66.06 | 29.55 |
| CDY07474 | Canola | cytosol | 66.06 | 29.55 |
| CDX85460 | Canola | cytosol | 62.44 | 29.49 |
| CDY15807 | Canola | cytosol | 65.61 | 29.41 |
| CDY04111 | Canola | cytosol | 64.71 | 29.01 |
| CDY56295 | Canola | cytosol | 64.71 | 28.95 |
| CDY16935 | Canola | cytosol | 63.35 | 28.46 |
| CDY02710 | Canola | cytosol | 63.35 | 28.46 |
| PGSC0003DMT400079706 | Potato | cytosol | 63.35 | 27.89 |
| CDX78739 | Canola | cytosol, plastid | 62.44 | 27.82 |
| Solyc03g098240.2.1 | Tomato | plastid | 62.9 | 27.69 |
| CDX70751 | Canola | cytosol, plastid | 64.25 | 22.12 |
| CDX87975 | Canola | cytosol | 5.88 | 12.75 |
| CDX87977 | Canola | cytosol | 10.41 | 10.09 |
| CDY11756 | Canola | plastid | 19.46 | 7.9 |
| CDX90118 | Canola | plastid | 19.46 | 7.9 |
| CDY48416 | Canola | cytosol | 7.69 | 7.33 |
| CDY48414 | Canola | cytosol | 7.69 | 7.33 |
| CDX92158 | Canola | cytosol | 6.33 | 5.05 |
| CDY71197 | Canola | cytosol | 0.45 | 0.96 |
| CDY12174 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:35.1 | GO:A0A078E5G5 | EnsemblPlants:CDX95824 | ProteinID:CDX95824 | ProteinID:CDX95824.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 | GO:GO:0006536 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00101770001 | InterPro:Glutamate_decarboxylase |
| InterPro:IPR015421 | PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF8 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major |
| InterPro:PyrdxlP-dep_de-COase | SUPFAM:SSF53383 | UniParc:UPI0004EDC5E0 | SEG:seg | : | : |
Description
BnaC05g35750D
Coordinates
chrLK031891:+:513702..514763
Molecular Weight (calculated)
25049.4 Da
IEP (calculated)
7.696
GRAVY (calculated)
-0.085
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEEHKYGL VYAGVGWIVW RTKDDLPEDL VFHINYLGAD QPTFTLNFSK GSSQIIAQYY QFIRLGFEGY KNIMENCMDN ARRLREGIEM TGKFDIVSKD
101: IGVPLVAFSL KDSSKHTVFE IAESLRKFGW IIPAYTMPAD AQHIAVLRVV IREDFSRGLA DRLITHIIQV LKEIDGLPSR VAHLAAAAAV SGGEVKTAKM
201: SLEDITKYWK RLVEHKRNIV C
101: IGVPLVAFSL KDSSKHTVFE IAESLRKFGW IIPAYTMPAD AQHIAVLRVV IREDFSRGLA DRLITHIIQV LKEIDGLPSR VAHLAAAAAV SGGEVKTAKM
201: SLEDITKYWK RLVEHKRNIV C
001: MVLSKTASKS DDSIHSTFAS RYVRNSISRF EIPKNSIPKE AAYQIINDEL KFDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNNVEMDQY PVTTDLQNRC
101: VNMIARLFNA PLGDGEAAIG VGTVGSSEAV MLAGLAFKRQ WQNKRKALGL PYDRPNIVTG ANIQVCLEKF ARYFEVELKE VKLREGYYVM DPDKAVEMVD
201: ENTICVVAIL GSTLTGEFED VKLLNDLLVE KNKKTGWDTP IHVDAASGGF IAPFLYPDLE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFNIVSKE NGVPLVAFSL KDSSRHNEFE VAEMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMASGKV NGVKKTPEET QREVTAYWKK FVDTKTDKNG VPLVASITNQ
101: VNMIARLFNA PLGDGEAAIG VGTVGSSEAV MLAGLAFKRQ WQNKRKALGL PYDRPNIVTG ANIQVCLEKF ARYFEVELKE VKLREGYYVM DPDKAVEMVD
201: ENTICVVAIL GSTLTGEFED VKLLNDLLVE KNKKTGWDTP IHVDAASGGF IAPFLYPDLE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFNIVSKE NGVPLVAFSL KDSSRHNEFE VAEMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMASGKV NGVKKTPEET QREVTAYWKK FVDTKTDKNG VPLVASITNQ
Arabidopsis Description
GAD3Glutamate decarboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPS4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.