Factsheet for Bra022241.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95824	Canola	cytosol	44.9	99.55
CDX92158	Canola	cytosol	53.88	95.31
Bra021272.1-P	Field mustard	cytosol	95.1	94.72
AT3G17760.1	Thale cress	cytosol	94.29	93.52
KRH38971	Soybean	cytosol	78.16	76.91
GSMUA_Achr8P22810_001	Banana	cytosol	74.08	76.58
TraesCS2D01G313500.1	Wheat	plastid	75.71	76.34
KRH09492	Soybean	cytosol	77.55	76.15
TraesCS2A01G315300.1	Wheat	plastid	75.51	76.13
Bra026621.1-P	Field mustard	cytosol	75.92	75.46
EES12248	Sorghum	plastid	75.1	75.41
VIT_17s0000g00920.t01	Wine grape	cytosol	77.55	75.25
HORVU2Hr1G078560.1	Barley	plastid	74.49	75.1
Os04t0447400-01	Rice	plasma membrane	74.08	75.0
Bra017429.1-P	Field mustard	cytosol	75.31	74.85
Zm00001d003531_P002	Maize	plastid	74.69	74.85
Bra008561.1-P	Field mustard	cytosol	71.22	74.1
Bra006397.1-P	Field mustard	cytosol	75.31	73.51
Bra004137.1-P	Field mustard	cytosol	58.78	73.47
Bra006396.1-P	Field mustard	cytosol, plastid	73.88	72.98
GSMUA_Achr7P02370_001	Banana	cytosol	73.88	72.55
PGSC0003DMT400079706	Potato	cytosol	74.29	72.51
Solyc03g098240.2.1	Tomato	plastid	74.08	72.31
TraesCS2B01G333700.1	Wheat	plastid	75.51	72.12
Bra021090.1-P	Field mustard	cytosol	72.45	71.86
Bra023612.1-P	Field mustard	cytosol	68.98	71.61
Bra006404.1-P	Field mustard	cytosol	14.08	45.1
Bra006399.1-P	Field mustard	cytosol, mitochondrion	7.76	40.0
Bra032860.1-P	Field mustard	cytosol	2.86	19.72
Bra010909.1-P	Field mustard	plastid	19.8	17.83

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EnsemblPlantsGene:Bra022241	EnsemblPlants:Bra022241.1	EnsemblPlants:Bra022241.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M4E0E4	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF8	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002547533	SEG:seg	:

Description

AT3G17760 (E=8e-271) GAD5 | GAD5 (glutamate decarboxylase 5); calmodulin binding

Coordinates

chrA05:+:18882440..18884345

Molecular Weight (calculated)

55043.1 Da

IEP (calculated)

5.370

GRAVY (calculated)

-0.110

Length

490 amino acids

Sequence
(BLAST)

001: MVLATNSDSE EHLHSTFASR YVRAVVPRFT MPNNSMPKDA AYQVISDELM LDGNPRLNLA SFVTTWMEPE CDKLIQESVN KNYVGMDEYP VTTELQNRCV
101: NMIANLFHAP MGEEEAAIGC GTVGSSEAIM LAGLAFKRKW QQRRRAQGLP TDNPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEGYYVMD PAKAVDMVDE
201: NTICVAAILG STLTGEFEDV KLLNDLLAEK NTETGWDVAI HVDAASGGFI APFLYPDLEW DFRLPWVKSI NVSGHKYGLV YAGVGWIVWR TKDDLPEELV
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ FIRLGFEGYK NIMENCMDNA RRLREGIEMT GKFDIVSKDI GVPLVAFSLK DSSKHTVFEI AESLRKFGWI
401: IPAYTMPADA QHIAVLRVVI REDFSRGLAD RLITHIIQVL KEIDGLPSRV AHLAAAAAVS GGEVKTAKMS LEDITKYWKR LVEHKRNIVC

Best Arabidopsis Sequence Match ( AT3G17760.2 )
(BLAST)

001: MVLATNSDSD EHLHSTFASR YVRAVVPRFK MPDHCMPKDA AYQVINDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSVN KNYVDMDEYP VTTELQNRCV
101: NMIANLFHAP VGEDEAAIGC GTVGSSEAIM LAGLAFKRKW QHRRKAQGLP IDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEDYYVMD PAKAVEMVDE
201: NTICVAAILG STLTGEFEDV KQLNDLLAEK NAETGWETPI HVDAASGGFI APFLYPDLEW DFRLPWVKSI NVSGHKYGLV YAGVGWVVWR TKDDLPEELV
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ FIRLGFEGYK NIMENCMDNA RRLREGIEMT GKFNIVSKDI GVPLVAFSLK DSSKHTVFEI AESLRKFGWI
401: IPAYTMPADA QHIAVLRVVI REDFSRGLAD RLITHIIQVL KEIEGLPSRI AHLAAAAAVS GDDEEVKVKT AKMSLEDITK YWKRLVEHKR NIVC

Arabidopsis Description

GAD5Glutamate decarboxylase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.