Factsheet for Bra017429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04111	Canola	cytosol	100.0	100.0
Bra026621.1-P	Field mustard	cytosol	96.96	96.96
AT2G02000.1	Thale cress	cytosol	90.26	89.0
GSMUA_Achr8P30730_001	Banana	cytosol	83.37	86.71
VIT_01s0011g06600.t01	Wine grape	cytosol	87.02	86.67
Solyc04g025530.2.1	Tomato	plastid	86.21	86.21
VIT_04s0079g00600.t01	Wine grape	cytosol	84.58	85.45
AT2G02010.2	Thale cress	plastid	94.32	85.32
PGSC0003DMT400058594	Potato	cytosol	84.79	84.1
Solyc01g005000.2.1	Tomato	cytosol	82.15	83.68
Bra006397.1-P	Field mustard	cytosol	85.19	83.67
Bra008561.1-P	Field mustard	cytosol	79.92	83.65
Bra006396.1-P	Field mustard	cytosol, plastid	82.76	82.26
Bra004137.1-P	Field mustard	cytosol	65.31	82.14
GSMUA_Achr4P31270_001	Banana	cytosol	80.53	81.19
Bra021090.1-P	Field mustard	cytosol	81.34	81.17
Bra023612.1-P	Field mustard	cytosol	76.06	79.45
Bra022241.1-P	Field mustard	cytosol	74.85	75.31
Bra021272.1-P	Field mustard	cytosol	74.04	74.19
PGSC0003DMT400003251	Potato	cytosol	22.52	72.55
Bra006404.1-P	Field mustard	cytosol	17.04	54.9
Bra006399.1-P	Field mustard	cytosol, mitochondrion	10.14	52.63
Bra032860.1-P	Field mustard	cytosol	3.04	21.13
Bra010909.1-P	Field mustard	plastid	19.47	17.65

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EnsemblPlantsGene:Bra017429	EnsemblPlants:Bra017429.1	EnsemblPlants:Bra017429.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M4DLP8	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI00025422D0	SEG:seg	:

Description

AT2G02010 (E=1e-263) GAD4 | GAD4 (glutamate decarboxylase 4); calmodulin binding

Coordinates

chrA09:+:15247835..15250221

Molecular Weight (calculated)

55990.3 Da

IEP (calculated)

5.612

GRAVY (calculated)

-0.268

Length

493 amino acids

Sequence
(BLAST)

001: MVLSKTASET DASIHSTFAS RYVRISLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLDDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKLTGWNTG IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKSDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLREGLEK TGRFNIVSKE NGVPLVAFSL KDNSRHDEFE VAETLRRFGW
401: IVPAYTMPAD AEHVTVLRVV IREDFSRTLA ERLVADFEKV LRELDTLPAK VHAKMANGKA KGVKKTEEET TREVTAYWKK FVETKKTNKN KIC

Best Arabidopsis Sequence Match ( AT2G02010.2 )
(BLAST)

001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.