Factsheet for Bra004137.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07474	Canola	cytosol	100.0	79.35
CDY39258	Canola	cytosol	99.74	79.15
Bra021090.1-P	Field mustard	cytosol	94.64	75.1
AT1G65960.2	Thale cress	cytosol	93.62	74.29
Bra008561.1-P	Field mustard	cytosol	84.69	70.49
Bra023612.1-P	Field mustard	cytosol	81.38	67.58
VIT_04s0079g00600.t01	Wine grape	cytosol	82.14	65.98
Bra006397.1-P	Field mustard	cytosol	84.18	65.74
Bra026621.1-P	Field mustard	cytosol	82.4	65.52
Bra017429.1-P	Field mustard	cytosol	82.14	65.31
GSMUA_Achr8P30730_001	Banana	cytosol	78.32	64.77
VIT_01s0011g06600.t01	Wine grape	cytosol	80.36	63.64
Bra006396.1-P	Field mustard	cytosol, plastid	80.36	63.51
GSMUA_Achr4P31270_001	Banana	cytosol	77.04	61.76
Bra022241.1-P	Field mustard	cytosol	73.47	58.78
Bra021272.1-P	Field mustard	cytosol	73.72	58.74
Bra006404.1-P	Field mustard	cytosol	21.43	54.9
Bra006399.1-P	Field mustard	cytosol, mitochondrion	13.27	54.74
Bra032860.1-P	Field mustard	cytosol	3.83	21.13
Bra010909.1-P	Field mustard	plastid	20.66	14.89

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EnsemblPlantsGene:Bra004137	EnsemblPlants:Bra004137.1	EnsemblPlants:Bra004137.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M4CIV3	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002541480	:	:

Description

AT1G65960 (E=3e-214) GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase

Coordinates

chrA07:+:17045411..17047136

Molecular Weight (calculated)

44558.9 Da

IEP (calculated)

6.641

GRAVY (calculated)

-0.177

Length

392 amino acids

Sequence
(BLAST)

001: MIARLFNAPL GETETAMGVG TVGSSEAIML AGLAFKRNWQ NKRKAEGKPY DKPNIVTGAN VQVCWEKFAR YFEVELKEVK LSEGYYVMDP DKAAEMVDEN
101: TICVAAILGS TLNGEFEDVK RLNDLLVKKN EETGWNTPIH VDAASGGFIA PFIYPELEWD FRLPLVKSIN VSGHKYGLVY AGIGWVVWRT QQDLPDELIF
201: HINYLGADQP TFTLNFSKGS SQIIAQYYQL IRLGFEGYKN VMENCRENMV VLREGIEKTE RFNIVSKEVG VPLVAFSLKD HSFHNEFEIS EMLRRFGWIV
301: PAYTMPADAQ HITVLRVVIR EDFSRTLAER LVADIVKVLH ELDTLPSKIS RKMGAEDFGN VKGKKVERDI LMEVIVGWRK FVKERKKMNG VC

Best Arabidopsis Sequence Match ( AT1G65960.1 )
(BLAST)

001: MLAGLAFKRK WQNKRKAEGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLSEGYYVM DPDKAAEMVD ENTICVAAIL GSTLNGEFED VKRLNDLLVK
101: KNEETGWNTP IHVDAASGGF IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RAAEDLPEEL IFHINYLGAD QPTFTLNFSK GSSQIIAQYY
201: QLIRLGFEGY KNVMENCIEN MVVLKEGIEK TERFNIVSKD QGVPVVAFSL KDHSFHNEFE ISEMLRRFGW IVPAYTMPAD AQHITVLRVV IREDFSRTLA
301: ERLVADISKV LHELDTLPSK ISKKMGIEGI AENVKEKKME KEILMEVIVG WRKFVKERKK MNGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.