Factsheet for GSMUA_Achr4P31270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30730_001	Banana	cytosol	86.71	89.45
VIT_04s0079g00600.t01	Wine grape	cytosol	85.89	86.07
Os03t0720300-01	Rice	plastid	86.09	85.57
EER93555	Sorghum	cytosol	85.89	85.19
Zm00001d047981_P001	Maize	cytosol	85.28	85.1
EER95206	Sorghum	cytosol	85.07	84.9
Zm00001d033805_P001	Maize	cytosol, extracellular	85.48	84.79
TraesCS4A01G369200.1	Wheat	cytosol	78.32	84.36
Os03t0236200-01	Rice	plasma membrane	84.66	84.15
VIT_01s0011g06600.t01	Wine grape	cytosol	85.07	84.04
CDY16935	Canola	cytosol	83.44	82.93
TraesCS4D01G052500.1	Wheat	plastid	83.84	82.83
TraesCS4A01G262600.1	Wheat	cytosol	83.84	82.83
TraesCS4B01G052300.1	Wheat	cytosol	83.84	82.83
HORVU4Hr1G008700.1	Barley	cytosol	83.23	82.22
Bra008561.1-P	Field mustard	cytosol	79.14	82.17
Solyc04g025530.2.1	Tomato	plastid	82.21	81.54
Solyc11g011920.1.1	Tomato	plastid	83.84	81.51
HORVU4Hr1G064790.6	Barley	cytosol	82.82	81.49
Bra026621.1-P	Field mustard	cytosol	82.0	81.34
KRG97998	Soybean	endoplasmic reticulum	83.64	81.31
TraesCS4B01G231400.1	Wheat	cytosol	83.03	81.2
CDY15807	Canola	cytosol	81.8	81.14
CDY09396	Canola	cytosol	81.8	81.14
Bra006397.1-P	Field mustard	cytosol	83.23	81.08
PGSC0003DMT400034693	Potato	cytosol	83.23	81.08
TraesCS4A01G075600.1	Wheat	cytosol	82.82	81.0
CDX78740	Canola	cytosol	66.87	80.94
KRH17286	Soybean	cytosol	83.23	80.91
KRH72934	Soybean	cytosol	83.23	80.91
AT5G17330.1	Thale cress	cytosol	82.82	80.68
KRH30893	Soybean	endoplasmic reticulum	67.28	80.64
CDY04111	Canola	cytosol	81.19	80.53
Bra017429.1-P	Field mustard	cytosol	81.19	80.53
CDY68511	Canola	cytosol, mitochondrion	66.67	80.49
Solyc05g054050.2.1	Tomato	plastid	81.8	80.48
GSMUA_Achr8P22810_001	Banana	cytosol	77.71	80.17
CDY56295	Canola	cytosol	80.98	80.16
PGSC0003DMT400058594	Potato	cytosol	80.98	79.68
Solyc01g005000.2.1	Tomato	cytosol	78.73	79.55
CDX78739	Canola	cytosol, plastid	80.37	79.23
Bra006396.1-P	Field mustard	cytosol, plastid	80.37	79.23
CDY02710	Canola	cytosol	79.55	79.06
Bra023612.1-P	Field mustard	cytosol	74.64	77.33
TraesCS4D01G232700.1	Wheat	cytosol	83.44	77.27
CDX85460	Canola	cytosol	73.82	77.14
CDY07474	Canola	cytosol	77.91	77.13
AT1G65960.2	Thale cress	cytosol	77.91	77.13
Bra004137.1-P	Field mustard	cytosol	61.76	77.04
AT2G02000.1	Thale cress	cytosol	78.73	77.0
CDY39258	Canola	cytosol	77.51	76.72
CDY28614	Canola	cytosol	60.74	75.77
CDY12173	Canola	cytosol	53.58	75.72
Bra021090.1-P	Field mustard	cytosol	75.87	75.1
GSMUA_Achr7P02370_001	Banana	cytosol	75.46	73.95
AT2G02010.2	Thale cress	plastid	81.39	73.03
KRH58569	Soybean	cytosol	72.8	72.21
KRH42467	Soybean	nucleus	72.6	72.01
KRH42468	Soybean	cytosol	72.6	72.01
PGSC0003DMT400006326	Potato	cytosol	20.65	70.63
KRH42466	Soybean	cytosol	67.28	69.85
GSMUA_Achr7P12330_001	Banana	cytosol	68.71	66.8
PGSC0003DMT400003251	Potato	cytosol	20.65	66.01
CDY71197	Canola	cytosol	13.29	62.5
CDX70751	Canola	cytosol, plastid	82.0	62.46
CDX70758	Canola	cytosol	14.52	60.17
CDX87975	Canola	cytosol	12.47	59.8
CDY12174	Canola	cytosol	14.11	57.02
CDX78746	Canola	cytosol	16.56	52.94
Bra006404.1-P	Field mustard	cytosol	16.56	52.94
CDX78742	Canola	cytosol	9.0	46.32
Bra006399.1-P	Field mustard	cytosol, mitochondrion	9.0	46.32
HORVU7Hr1G081730.1	Barley	peroxisome	16.56	39.51
Os05t0421750-00	Rice	mitochondrion	20.04	37.55
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	20.45	18.66

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752
GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr4G31270_001	EnsemblPlants:GSMUA_Achr4P31270_001	EnsemblPlants:GSMUA_Achr4T31270_001	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M0STN9	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000296EE64	:	:

Description

Glutamate decarboxylase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31270_001]

Coordinates

chr4:-:28499943..28503899

Molecular Weight (calculated)

55274.4 Da

IEP (calculated)

6.448

GRAVY (calculated)

-0.261

Length

489 amino acids

Sequence
(BLAST)

001: MALSRIASET DVSIQHTFAS RYVRDSLPRF RMPANSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMAAV NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PIGESEAAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PCDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLRDDYFVM DPHKAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLTQ KNKETGWDTP IHVDAASGGF IAPFLYPDLT WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RSKEDLPEEL
301: IFHINYLGTD QPTFTLNFSK GSSQVIAQYY QLIRLGYEGY KNIIENCQEN ALVLKNGLEK TGRFNIVSKD NGVPLVAFSL KDRSRHDEFE VSDFLRRYGW
401: IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVHDIERV LHELDALPPK NNGEEAKHAR EMKIQRSVTE ALKKMVLASK AKGKTTGVC

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.