Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G052500.1 | Wheat | plastid | 98.99 | 98.99 |
| TraesCS4A01G262600.1 | Wheat | cytosol | 98.99 | 98.99 |
| TraesCS4B01G052300.1 | Wheat | cytosol | 98.79 | 98.79 |
| EER93555 | Sorghum | cytosol | 88.48 | 88.84 |
| Os03t0720300-01 | Rice | plastid | 87.88 | 88.41 |
| Zm00001d033805_P001 | Maize | cytosol, extracellular | 87.47 | 87.83 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 82.63 | 86.29 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 83.03 | 84.22 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 84.04 | 84.04 |
| HORVU4Hr1G064790.6 | Barley | cytosol | 84.04 | 83.7 |
| Solyc11g011920.1.1 | Tomato | plastid | 84.85 | 83.5 |
| PGSC0003DMT400034693 | Potato | cytosol | 84.65 | 83.47 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 82.22 | 83.23 |
| Solyc05g054050.2.1 | Tomato | plastid | 83.03 | 82.7 |
| HORVU2Hr1G078560.1 | Barley | plastid | 78.18 | 79.63 |
| HORVU3Hr1G003050.7 | Barley | cytosol | 75.15 | 75.92 |
| HORVU3Hr1G112860.1 | Barley | cytosol | 73.74 | 73.44 |
| CDX70758 | Canola | cytosol | 14.75 | 61.86 |
| CDX78746 | Canola | cytosol | 16.97 | 54.9 |
| Bra006404.1-P | Field mustard | cytosol | 16.97 | 54.9 |
| CDX78742 | Canola | cytosol | 10.51 | 54.74 |
| Bra006399.1-P | Field mustard | cytosol, mitochondrion | 10.3 | 53.68 |
| HORVU2Hr1G078580.10 | Barley | cytosol | 56.57 | 51.19 |
| HORVU7Hr1G081730.1 | Barley | peroxisome | 16.97 | 40.98 |
| Os05t0421750-00 | Rice | mitochondrion | 20.4 | 38.7 |
| HORVU3Hr1G015150.11 | Barley | cytosol | 19.19 | 17.63 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 | GO:GO:0006536 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016831 | GO:GO:0019752 |
| GO:GO:0030170 | InterPro:Glutamate_decarboxylase | EnsemblPlantsGene:HORVU4Hr1G008700 | EnsemblPlants:HORVU4Hr1G008700.1 | InterPro:IPR015421 | UniProt:M0XZZ4 |
| PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF9 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase |
| SUPFAM:SSF53383 | TIGRFAMs:TIGR01788 | UniParc:UPI000295DACD | SEG:seg | : | : |
Description
Glutamate decarboxylase [Source:UniProtKB/TrEMBL;Acc:M0XZZ4]
Coordinates
chrchr4H:+:23875262..23881413
Molecular Weight (calculated)
55779.6 Da
IEP (calculated)
5.278
GRAVY (calculated)
-0.251
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSHAASGG SSDDSVHSTF ASRYVRASLP RYRMPENSIP KEAAYQIIND ELMLDGNPRL NLASFVTTWM EPECNKLMMD SINKNYVDMD EYPVTTELQN
101: RCVNMIAHLF NAPLGETETA VGVGTVGSSE AIMLAGLAFK RRWQNKMRAA GKPCDKPNIV TGANVQVCWE KFARYFEVEL KEVKLSEGYY VMDPEKAVEM
201: VDENTICVAA ILGSTLNGEF EDVKMLNDLL VKKNEETGWD TPIHVDAASG GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWC IWRSKEDLPD
301: ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNIMDNCQ ENAMVLKEGL ERTGRFNIVS KDQGVPLVAF SLKDSSRHDE FEISEFLRRF
401: GWIVPAYTMP PDAQHVTVLR VVVREDFSRT FAERLVIDIE KVLHELDALP SRSSGPSLQH PNGDTVSEKD LARQREVVSV WKRAVAARKK TQGVC
101: RCVNMIAHLF NAPLGETETA VGVGTVGSSE AIMLAGLAFK RRWQNKMRAA GKPCDKPNIV TGANVQVCWE KFARYFEVEL KEVKLSEGYY VMDPEKAVEM
201: VDENTICVAA ILGSTLNGEF EDVKMLNDLL VKKNEETGWD TPIHVDAASG GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWC IWRSKEDLPD
301: ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNIMDNCQ ENAMVLKEGL ERTGRFNIVS KDQGVPLVAF SLKDSSRHDE FEISEFLRRF
401: GWIVPAYTMP PDAQHVTVLR VVVREDFSRT FAERLVIDIE KVLHELDALP SRSSGPSLQH PNGDTVSEKD LARQREVVSV WKRAVAARKK TQGVC
001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC
Arabidopsis Description
GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.