Factsheet for HORVU2Hr1G078580.10

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G334000.1	Wheat	cytosol	74.95	82.16
TraesCS2D01G313800.1	Wheat	cytosol	74.95	82.16
TraesCS2A01G315800.1	Wheat	cytosol	74.59	81.76
Os04t0447800-01	Rice	cytosol, plasma membrane	65.63	71.8
EES10890	Sorghum	cytosol	66.18	71.26
Zm00001d003522_P002	Maize	cytosol	64.9	69.88
GSMUA_Achr7P12330_001	Banana	cytosol	57.22	62.23
VIT_01s0011g06610.t01	Wine grape	cytosol	53.38	57.14
HORVU4Hr1G008700.1	Barley	cytosol	51.19	56.57
HORVU4Hr1G064790.6	Barley	cytosol	50.82	55.94
HORVU2Hr1G078560.1	Barley	plastid	49.18	55.35
HORVU3Hr1G003050.7	Barley	cytosol	49.36	55.1
HORVU3Hr1G112860.1	Barley	cytosol	48.81	53.72
HORVU7Hr1G081730.1	Barley	peroxisome	17.55	46.83
HORVU3Hr1G015150.11	Barley	cytosol	13.35	13.54

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	UniProt:A0A287IK28	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488
GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831
GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	EnsemblPlantsGene:HORVU2Hr1G078580	EnsemblPlants:HORVU2Hr1G078580.10	InterPro:IPR015421
PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF4	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase
SUPFAM:SSF53383	UniParc:UPI000B468805	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:569408619..569410795

Molecular Weight (calculated)

60915.7 Da

IEP (calculated)

10.234

GRAVY (calculated)

-0.337

Length

547 amino acids

Sequence
(BLAST)

001: MVLTHVQSDE AAASAAVFAS RYVQEPVPSY ELGEKSISKD AAYQIIHDEL LLDGSPRLNL ASFVTTWMEP ECDRLILEGM NKNYADMDEY PVTTELQNRC
101: VNIIARLFNA PVGTGETAVG VGTVGSSEAI MLAGLAFKRR WQNRRKAEGK PHDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGCYVM DPDKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKRLNDLLVA KNKQTRSASN PCIRIQKSCL MIMTWLASSG WQVGHPDPRG RGERRVHRAV PVPGAGVGLP AAAGEEHQRQ
301: RPQVRPRLPR RRVGDMAQQG GPPRRAHLPH QLPWRRPANL HAQLLQRVQS NHRAVLPISS ARFRGTKFIN RPIISHSTYR ASRRMQGYKN VMENCVESAR
401: TLREGLLRTG RFDVISKEDG VPLVAFTFRG IRDGSPAFKL SANLRRFGWI VPAYTMPANL EHMTVLRVVV REDFGRPLAE RFLSHVRMAL SELDLAAKGP
501: VPKMRLTIEL GPARSAEEEA SVRVVKREAV SGHRSVSLVS GKTKGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.