Factsheet for HORVU3Hr1G112860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G523200.1	Wheat	cytosol, plastid	94.77	94.01
TraesCS3A01G515300.1	Wheat	cytosol, plastid	94.57	93.81
TraesCS3B01G583600.1	Wheat	cytosol, plastid	94.17	93.41
HORVU3Hr1G003050.7	Barley	cytosol	84.31	85.51
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	80.68	80.68
HORVU2Hr1G078560.1	Barley	plastid	73.04	74.69
HORVU4Hr1G008700.1	Barley	cytosol	73.44	73.74
HORVU4Hr1G064790.6	Barley	cytosol	72.43	72.43
OQU80616	Sorghum	plastid	80.48	66.89
Zm00001d031749_P005	Maize	cytosol	63.38	60.23
HORVU2Hr1G078580.10	Barley	cytosol	53.72	48.81
HORVU7Hr1G081730.1	Barley	peroxisome	16.1	39.02
HORVU3Hr1G015150.11	Barley	cytosol	18.11	16.7

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EMBL:AK372069	UniProt:F2E7E5	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351
GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829
GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	EnsemblPlantsGene:HORVU3Hr1G112860	EnsemblPlants:HORVU3Hr1G112860.1
InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002007DF2	SEG:seg	:

Description

Glutamate decarboxylase [Source:UniProtKB/TrEMBL;Acc:F2E7E5]

Coordinates

chrchr3H:+:687236876..687241686

Molecular Weight (calculated)

55477.5 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.187

Length

497 amino acids

Sequence
(BLAST)

001: MVISHSSSGA GESAYNTFSS RYARVELPRY RMPEKSVPKE TAYQMITDEL MLDGNPRLDL ASFVTTWMEP ECDRLIMDSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PINEDEKAIG VSTVGSSEAI MLAGLAFKRK WANKRKEQGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLTEGYYVM NPSKAVEMVD
201: ENTICVAAIL GSTLTGEYED VKLLNDLLVE KNKETGWNVP IHVDAASGGF IAPFLHPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVVW RSKGDLPEEL
301: IFHINYLGTD QPTFTLNFSK GASQIIAQYY QLIRLGFQGY KHIMENCQAN AAVLREGMEA TGRFSILSKE DGVPLVAASL KDSTNFSVFD VSENLRRFGW
401: IVPAYTMAPD AEHVAVLRIV IREDFSRSLA QRLLADINKV LHELDAHAVH AIKATATQTG KGAAADNGKV TQKSVLDTEK EFAAACMSLV RKKTGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.