Factsheet for HORVU2Hr1G078560.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G313500.1	Wheat	plastid	95.27	95.27
TraesCS2A01G315300.1	Wheat	plastid	94.86	94.86
Os04t0447400-01	Rice	plasma membrane	90.33	90.7
TraesCS2B01G333700.1	Wheat	plastid	95.68	90.64
EES12248	Sorghum	plastid	90.74	90.37
Zm00001d003531_P002	Maize	plastid	89.92	89.37
GSMUA_Achr8P22810_001	Banana	cytosol	77.98	79.96
HORVU4Hr1G008700.1	Barley	cytosol	79.63	78.18
Solyc03g098240.2.1	Tomato	plastid	78.19	75.7
HORVU4Hr1G064790.6	Barley	cytosol	77.37	75.65
PGSC0003DMT400079706	Potato	cytosol	77.98	75.5
HORVU3Hr1G003050.7	Barley	cytosol	75.93	75.31
GSMUA_Achr7P02370_001	Banana	cytosol	76.95	74.95
KRH38971	Soybean	cytosol	76.75	74.9
VIT_17s0000g00920.t01	Wine grape	cytosol	77.78	74.85
KRH09492	Soybean	cytosol	76.75	74.75
AT3G17760.1	Thale cress	cytosol	75.93	74.7
Bra022241.1-P	Field mustard	cytosol	75.1	74.49
Bra021272.1-P	Field mustard	cytosol	74.9	73.98
HORVU3Hr1G112860.1	Barley	cytosol	74.69	73.04
AT3G17720.1	Thale cress	mitochondrion	26.54	66.49
CDX87977	Canola	cytosol	29.42	62.72
HORVU2Hr1G078580.10	Barley	cytosol	55.35	49.18
HORVU7Hr1G081730.1	Barley	peroxisome	16.46	39.02
HORVU3Hr1G015150.11	Barley	cytosol	19.14	17.25

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752
GO:GO:0030170	InterPro:Glutamate_decarboxylase	EnsemblPlantsGene:HORVU2Hr1G078560	EnsemblPlants:HORVU2Hr1G078560.1	InterPro:IPR015421	UniProt:M0Y564
PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF1	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase
SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000296D427	SEG:seg	:	:

Description

Glutamate decarboxylase [Source:UniProtKB/TrEMBL;Acc:M0Y564]

Coordinates

chrchr2H:-:569257778..569260586

Molecular Weight (calculated)

54976.0 Da

IEP (calculated)

5.678

GRAVY (calculated)

-0.201

Length

486 amino acids

Sequence
(BLAST)

001: MALSRAQTNS GESLICSTFA SRYVRTALPR FKIPEQSIPK EAAYQIINDE LMLDGNPRLN LASFVTTWME PECNKLIQDS INKNYVDMDE YPVTTELQNR
101: CVNMIAHLFN APIGDEETAV GVGTIGSSEA IMLAGLAFKR KWQNKMKAEG KPFDKPNIVT GANVQVCWEK FARYFEVELK EVKLKEGYYV MDPEKAVELV
201: DENTICVAAI LGSTLNGEFE DVKMLNDLLV AKNAETGWDT PIHVDAASGG FIAPFIYPEL EWDFRLPLVK SINVSGHKYG LVYAGVGWVI WRNKEDLPDE
301: LIFHINYLGA DQPTFTLNFS KGSSQIIAQY YQLIRLGFEG YKDIMQNCRD NATVLREGVE KMGYFDLVSK DSGVPLVAFS LKDSSRYTVF DVVESLRRFG
401: WIVPAYTMPA DAEHIAVMRV VIREDFSRGL AERLITDLNK VMVEMDAHAK KHGHHEHAKK TAHEIEKEVT TYWRSFVARK KSSLVC

Best Arabidopsis Sequence Match ( AT2G02010.2 )
(BLAST)

001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.