Factsheet for GSMUA_Achr8P22810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30730_001	Banana	cytosol	80.59	80.59
GSMUA_Achr7P02370_001	Banana	cytosol	83.97	79.76
Os04t0447400-01	Rice	plasma membrane	80.59	78.93
TraesCS2D01G313500.1	Wheat	plastid	80.8	78.81
TraesCS2A01G315300.1	Wheat	plastid	80.8	78.81
Zm00001d003531_P002	Maize	plastid	81.22	78.73
EES12248	Sorghum	plastid	80.38	78.07
HORVU2Hr1G078560.1	Barley	plastid	79.96	77.98
GSMUA_Achr4P31270_001	Banana	cytosol	80.17	77.71
VIT_17s0000g00920.t01	Wine grape	cytosol	80.8	75.84
KRH38971	Soybean	cytosol	79.54	75.7
KRH09492	Soybean	cytosol	79.54	75.55
AT3G17760.1	Thale cress	cytosol	78.27	75.1
PGSC0003DMT400079706	Potato	cytosol	79.11	74.7
TraesCS2B01G333700.1	Wheat	plastid	80.8	74.66
Solyc03g098240.2.1	Tomato	plastid	78.69	74.3
Bra022241.1-P	Field mustard	cytosol	76.58	74.08
Bra021272.1-P	Field mustard	cytosol	76.79	73.98
AT3G17720.1	Thale cress	mitochondrion	28.48	69.59
GSMUA_Achr7P12330_001	Banana	cytosol	71.1	67.0
CDX87977	Canola	cytosol	31.01	64.47
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	21.1	18.66

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752
GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr8G22810_001	EnsemblPlants:GSMUA_Achr8P22810_001	EnsemblPlants:GSMUA_Achr8T22810_001	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M0TST4	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI00029618A7	SEG:seg	:

Description

Glutamate decarboxylase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22810_001]

Coordinates

chr8:+:27358228..27361770

Molecular Weight (calculated)

53194.5 Da

IEP (calculated)

4.657

GRAVY (calculated)

-0.171

Length

474 amino acids

Sequence
(BLAST)

001: MTLSAVASDA DDSVAYTFAS RYVREALPRF RIPEQSIPKD AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDRLIMAAV NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PIGEDETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEEK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLKEGYYVM DPAKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLTE KNQETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPQVKS INVSGHKYGL VYAGVGWVVW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQIIAQYY QFIRLGFEGF RNIMENCMEN AKVLKAGIEG TETFDIVSKD VGVPLVAFSL KDSGKYTVFD VSETLRRFGW
401: IVPAYTMPAD AEHVAVLRVV IREDFSRSLA ERLVTDIKKV LTDLENRWTK ATMITHVKAE ENPDGGGAKT SGVC

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.