Factsheet for GSMUA_Achr7P02370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P22810_001	Banana	cytosol	79.76	83.97
Os04t0447400-01	Rice	plasma membrane	76.35	78.72
Zm00001d003531_P002	Maize	plastid	76.55	78.12
EES12248	Sorghum	plastid	75.95	77.66
GSMUA_Achr8P30730_001	Banana	cytosol	73.55	77.43
VIT_17s0000g00920.t01	Wine grape	cytosol	78.16	77.23
HORVU2Hr1G078560.1	Barley	plastid	74.95	76.95
TraesCS2D01G313500.1	Wheat	plastid	74.95	76.95
TraesCS2A01G315300.1	Wheat	plastid	74.75	76.75
Solyc03g098240.2.1	Tomato	plastid	76.95	76.49
PGSC0003DMT400079706	Potato	cytosol	76.55	76.1
KRH38971	Soybean	cytosol	75.35	75.5
GSMUA_Achr4P31270_001	Banana	cytosol	73.95	75.46
KRH09492	Soybean	cytosol	75.15	75.15
AT3G17760.1	Thale cress	cytosol	73.95	74.7
Bra022241.1-P	Field mustard	cytosol	72.55	73.88
Bra021272.1-P	Field mustard	cytosol	72.34	73.37
TraesCS2B01G333700.1	Wheat	plastid	74.95	72.9
AT3G17720.1	Thale cress	mitochondrion	26.05	67.01
GSMUA_Achr7P12330_001	Banana	cytosol	66.93	66.4
CDX87977	Canola	cytosol	28.46	62.28
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	19.84	18.47

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752
GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr7G02370_001	EnsemblPlants:GSMUA_Achr7P02370_001	EnsemblPlants:GSMUA_Achr7T02370_001	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M0TE27	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF8	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI000295C604	:	:

Description

Glutamate decarboxylase [Source:GMGC_GENE;Acc:GSMUA_Achr7G02370_001]

Coordinates

chr7:+:1862081..1864234

Molecular Weight (calculated)

56169.4 Da

IEP (calculated)

5.756

GRAVY (calculated)

-0.194

Length

499 amino acids

Sequence
(BLAST)

001: MVVTTTRVDT GEPLYCTFAS RYVRASLPRF KMPEQSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDRLIMSAI NKNYVDMDGY PVTTELQNRC
101: VNMIAHLFNA PIGEDEIAVG VGTVGSSEAI MLAGLAFKRK WQNERKAEGK PHDKPNIVTG ANVQVCWEKF AKYFEVELKE VKLREGFYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED IKLLNHLLTE KNRETGWSTP IHVDAASGGF VAPFLYPDLE WDFRLPLVKS INVSGHKYGL VYAGVGWIVW RNKEDLPEEL
301: IFHVNYLGSD QPTFTLNFSK GSSQIIAQYY QFIRLGFEGY RSIMENCMEN AKALKEGIQA TGRFEMVSGD VGVPLVAFSL RDSSRYTVFD VSESLRRFGW
401: IVPAYTMPAD AEHMAVLRVV IREDFSRSLA ERLVSDIRKA VADLDGRWAR TAIVAEVKAE DKPGGVVVYR KSVGETTQQQ EIYGHRRGRV EQKKTSGVC

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.