Factsheet for GSMUA_Achr8P30730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g06600.t01	Wine grape	cytosol	90.93	87.07
GSMUA_Achr4P31270_001	Banana	cytosol	89.45	86.71
VIT_04s0079g00600.t01	Wine grape	cytosol	88.61	86.07
Zm00001d047981_P001	Maize	cytosol	88.82	85.92
TraesCS4A01G369200.1	Wheat	cytosol	82.28	85.9
EER95206	Sorghum	cytosol	88.61	85.71
Os03t0720300-01	Rice	plastid	88.19	84.96
Os03t0236200-01	Rice	plasma membrane	87.76	84.55
EER93555	Sorghum	cytosol	87.76	84.38
Bra026621.1-P	Field mustard	cytosol	87.55	84.18
KRG97998	Soybean	endoplasmic reticulum	89.03	83.9
CDY09396	Canola	cytosol	87.13	83.77
Zm00001d033805_P001	Maize	cytosol, extracellular	86.92	83.57
Solyc04g025530.2.1	Tomato	plastid	86.92	83.57
Bra017429.1-P	Field mustard	cytosol	86.71	83.37
CDY04111	Canola	cytosol	86.71	83.37
CDY15807	Canola	cytosol	86.71	83.37
CDY16935	Canola	cytosol	86.5	83.33
KRH72934	Soybean	cytosol	88.4	83.3
TraesCS4A01G262600.1	Wheat	cytosol	86.92	83.23
TraesCS4B01G052300.1	Wheat	cytosol	86.92	83.23
TraesCS4D01G052500.1	Wheat	plastid	86.92	83.23
Solyc11g011920.1.1	Tomato	plastid	87.97	82.9
KRH17286	Soybean	cytosol	87.97	82.9
PGSC0003DMT400034693	Potato	cytosol	87.76	82.87
CDY56295	Canola	cytosol	86.29	82.79
HORVU4Hr1G008700.1	Barley	cytosol	86.29	82.63
HORVU4Hr1G064790.6	Barley	cytosol	86.5	82.5
Solyc05g054050.2.1	Tomato	plastid	86.08	82.09
Bra008561.1-P	Field mustard	cytosol	81.43	81.95
KRH30893	Soybean	endoplasmic reticulum	70.46	81.86
TraesCS4B01G231400.1	Wheat	cytosol	86.29	81.8
PGSC0003DMT400058594	Potato	cytosol	85.65	81.69
Solyc01g005000.2.1	Tomato	cytosol	83.33	81.61
TraesCS4A01G075600.1	Wheat	cytosol	86.08	81.6
Bra006397.1-P	Field mustard	cytosol	86.29	81.47
AT5G17330.1	Thale cress	cytosol	85.65	80.88
GSMUA_Achr8P22810_001	Banana	cytosol	80.59	80.59
CDX78739	Canola	cytosol, plastid	84.18	80.44
Bra006396.1-P	Field mustard	cytosol, plastid	84.18	80.44
CDX78740	Canola	cytosol	68.35	80.2
CDY68511	Canola	cytosol, mitochondrion	68.14	79.75
AT1G65960.2	Thale cress	cytosol	82.49	79.15
AT2G02000.1	Thale cress	cytosol	83.33	79.0
CDY07474	Canola	cytosol	82.28	78.95
CDY02710	Canola	cytosol	81.86	78.86
CDY39258	Canola	cytosol	82.07	78.74
Bra004137.1-P	Field mustard	cytosol	64.77	78.32
TraesCS4D01G232700.1	Wheat	cytosol	86.71	77.84
CDY28614	Canola	cytosol	64.14	77.55
Bra021090.1-P	Field mustard	cytosol	80.8	77.53
CDY12173	Canola	cytosol	56.33	77.17
CDX85460	Canola	cytosol	75.74	76.71
Bra023612.1-P	Field mustard	cytosol	76.37	76.69
PGSC0003DMT400006326	Potato	cytosol	22.78	75.52
AT2G02010.2	Thale cress	plastid	86.08	74.86
GSMUA_Achr7P02370_001	Banana	cytosol	77.43	73.55
KRH42468	Soybean	cytosol	76.16	73.23
KRH58569	Soybean	cytosol	76.16	73.23
KRH42467	Soybean	nucleus	75.74	72.82
KRH42466	Soybean	cytosol	69.83	70.28
CDY71197	Canola	cytosol	14.98	68.27
GSMUA_Achr7P12330_001	Banana	cytosol	71.94	67.79
PGSC0003DMT400003251	Potato	cytosol	21.1	65.36
CDY12174	Canola	cytosol	16.24	63.64
CDX70751	Canola	cytosol, plastid	85.44	63.08
CDX87975	Canola	cytosol	13.29	61.76
CDX70758	Canola	cytosol	14.13	56.78
CDX78746	Canola	cytosol	16.03	49.67
Bra006404.1-P	Field mustard	cytosol	16.03	49.67
CDX78742	Canola	cytosol	8.65	43.16
Bra006399.1-P	Field mustard	cytosol, mitochondrion	8.65	43.16
HORVU7Hr1G081730.1	Barley	peroxisome	17.3	40.0
Os05t0421750-00	Rice	mitochondrion	20.46	37.16
GSMUA_Achr6P06370_001	Banana	golgi, mitochondrion, plasma membrane, vacuole	20.89	18.47

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0016831	GO:GO:0019752
GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr8G30730_001	EnsemblPlants:GSMUA_Achr8P30730_001	EnsemblPlants:GSMUA_Achr8T30730_001	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M0TV25	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002959CDD	:	:

Description

Glutamate decarboxylase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G30730_001]

Coordinates

chr8:+:32664576..32667538

Molecular Weight (calculated)

53870.9 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.250

Length

474 amino acids

Sequence
(BLAST)

001: MVLSKTASQT DVSVHSTFAS RYVRDALPRF RMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMAAI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLGESEAAVG VGTVGSSEAI MLAGLAFKRK WQNRRKAEGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLRDGYYVM DPKKAVELVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLAE KNKKKGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RSKDDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGYEGY KNVMENCQEN AMVLKRGLER TGRFDIVSKD NGVPLVAFSL KDRSRHDEFE VSDFLRRFGW
401: IVPAYTMPPD AQHVTVLRVV IREDFSRTLA ERLVMDVQKV LHELDSLPPK QPKRSVTDAW KKFVMAKKTT NIVC

Best Arabidopsis Sequence Match ( AT2G02010.2 )
(BLAST)

001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.