Factsheet for TraesCS4A01G369200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G064790.6	Barley	cytosol	93.83	85.71
TraesCS4A01G075600.1	Wheat	cytosol	93.83	85.2
EER95206	Sorghum	cytosol	90.31	83.67
Zm00001d047981_P001	Maize	cytosol	89.21	82.65
Os03t0236200-01	Rice	plasma membrane	89.21	82.32
GSMUA_Achr8P30730_001	Banana	cytosol	85.9	82.28
TraesCS4A01G262600.1	Wheat	cytosol	86.78	79.6
VIT_04s0079g00600.t01	Wine grape	cytosol	85.02	79.1
VIT_01s0011g06600.t01	Wine grape	cytosol	85.68	78.59
GSMUA_Achr4P31270_001	Banana	cytosol	84.36	78.32
AT5G17330.1	Thale cress	cytosol	85.24	77.09
Solyc05g054050.2.1	Tomato	plastid	83.26	76.06
Solyc11g011920.1.1	Tomato	plastid	83.92	75.75
PGSC0003DMT400034693	Potato	cytosol	83.7	75.7
KRG97998	Soybean	endoplasmic reticulum	83.7	75.55
KRH72934	Soybean	cytosol	83.48	75.35
AT1G65960.2	Thale cress	cytosol	81.72	75.1
KRH17286	Soybean	cytosol	82.82	74.75
KRH30893	Soybean	endoplasmic reticulum	66.3	73.77
TraesCS2A01G315300.1	Wheat	plastid	78.85	73.66
AT2G02000.1	Thale cress	cytosol	80.4	73.0
TraesCS3A01G022600.3	Wheat	cytosol	77.09	71.43
TraesCS3A01G515300.1	Wheat	cytosol, plastid	77.53	70.26
AT2G02010.2	Thale cress	plastid	83.7	69.72
TraesCS2A01G315800.1	Wheat	cytosol	73.57	66.93
CDX70758	Canola	cytosol	14.54	55.93
CDX78746	Canola	cytosol	16.52	49.02
Bra006404.1-P	Field mustard	cytosol	16.52	49.02
CDX78742	Canola	cytosol	7.49	35.79
Bra006399.1-P	Field mustard	cytosol, mitochondrion	7.49	35.79
TraesCS3A01G085400.2	Wheat	plasma membrane	21.37	17.51

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS4A01G369200	EnsemblPlants:TraesCS4A01G369200.1
TIGR:cd06450	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:641451084..641452850

Molecular Weight (calculated)

51761.8 Da

IEP (calculated)

5.059

GRAVY (calculated)

-0.263

Length

454 amino acids

Sequence
(BLAST)

001: MVLSRAVSDT DVSVHSTFAS RYVRSSLPRY HMPEKSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLVMASM NKNYVDMDEY PVTTEFQNRC
101: VNMIAHLFHA PLGESETAVG VGTVGSSEAI MLAGLAFKRK WQNKRRAEGK PFDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEQAVEMVD
201: ENTICVAAIL GSTLNGEFED VKRINDLLEE KNKETGWETA IHVDAASGGF IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYPGIGWCVW RTKDDLPDDL
301: VFHINYLGTD QPTFTLNFSK GSSQVIAQYY QFIRQGFEGY RNIMENCQEN AMVVKEGLER TGRFNIVSKD QGVPLVAFSL KDHTRHDEFE VSDMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREEFSRTLA ERLVLHIDTV MNQLDALPSN SVCQ

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.