Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09396 | Canola | cytosol | 90.6 | 91.89 |
| CDY15807 | Canola | cytosol | 90.6 | 91.89 |
| Bra026621.1-P | Field mustard | cytosol | 90.4 | 91.68 |
| Bra017429.1-P | Field mustard | cytosol | 89.0 | 90.26 |
| CDY04111 | Canola | cytosol | 89.0 | 90.26 |
| CDY56295 | Canola | cytosol | 89.0 | 90.08 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 82.8 | 83.64 |
| AT2G02010.2 | Thale cress | plastid | 91.0 | 83.49 |
| Solyc04g025530.2.1 | Tomato | plastid | 82.2 | 83.37 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 79.0 | 83.33 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 81.0 | 82.99 |
| PGSC0003DMT400058594 | Potato | cytosol | 81.4 | 81.89 |
| Solyc01g005000.2.1 | Tomato | cytosol | 78.4 | 80.99 |
| TraesCS4D01G052500.1 | Wheat | plastid | 79.8 | 80.61 |
| TraesCS4A01G262600.1 | Wheat | cytosol | 79.8 | 80.61 |
| EER95206 | Sorghum | cytosol | 78.8 | 80.41 |
| Zm00001d047981_P001 | Maize | cytosol | 78.8 | 80.41 |
| TraesCS4B01G052300.1 | Wheat | cytosol | 79.6 | 80.4 |
| TraesCS4A01G369200.1 | Wheat | cytosol | 73.0 | 80.4 |
| Os03t0720300-01 | Rice | plastid | 79.0 | 80.28 |
| EER93555 | Sorghum | cytosol | 79.0 | 80.12 |
| Zm00001d033805_P001 | Maize | cytosol, extracellular | 78.4 | 79.51 |
| Os03t0236200-01 | Rice | plasma membrane | 77.8 | 79.06 |
| AT5G17330.1 | Thale cress | cytosol | 79.2 | 78.88 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 77.0 | 78.73 |
| TraesCS4B01G231400.1 | Wheat | cytosol | 78.2 | 78.2 |
| AT1G65960.2 | Thale cress | cytosol | 77.2 | 78.14 |
| TraesCS4A01G075600.1 | Wheat | cytosol | 77.2 | 77.2 |
| TraesCS4D01G232700.1 | Wheat | cytosol | 78.4 | 74.24 |
| AT3G17760.1 | Thale cress | cytosol | 72.6 | 73.48 |
| PGSC0003DMT400003251 | Potato | cytosol | 22.2 | 72.55 |
| AT3G17720.1 | Thale cress | mitochondrion | 26.2 | 67.53 |
| Os05t0421750-00 | Rice | mitochondrion | 19.4 | 37.16 |
| AT1G27980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 18.6 | 17.1 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | EntrezGene:814731 | ProteinID:AAD20093.1 | ProteinID:AEC05531.1 | EMBL:AK118125 | ArrayExpress:AT2G02000 |
| EnsemblPlantsGene:AT2G02000 | RefSeq:AT2G02000 | TAIR:AT2G02000 | RefSeq:AT2G02000-TAIR-G | EnsemblPlants:AT2G02000.1 | TAIR:AT2G02000.1 |
| Unigene:At.41525 | Symbol:GAD3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005575 | GO:GO:0006536 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 | InterPro:Glutamate_decarboxylase |
| InterPro:IPR015421 | RefSeq:NP_178309.1 | PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF2 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | UniProt:Q9ZPS4 | SUPFAM:SSF53383 | TIGRFAMs:TIGR01788 | UniParc:UPI00000484D6 |
Description
GAD3Glutamate decarboxylase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPS4]
Coordinates
chr2:-:469370..472070
Molecular Weight (calculated)
56509.9 Da
IEP (calculated)
6.727
GRAVY (calculated)
-0.247
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSKTASKS DDSIHSTFAS RYVRNSISRF EIPKNSIPKE AAYQIINDEL KFDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNNVEMDQY PVTTDLQNRC
101: VNMIARLFNA PLGDGEAAIG VGTVGSSEAV MLAGLAFKRQ WQNKRKALGL PYDRPNIVTG ANIQVCLEKF ARYFEVELKE VKLREGYYVM DPDKAVEMVD
201: ENTICVVAIL GSTLTGEFED VKLLNDLLVE KNKKTGWDTP IHVDAASGGF IAPFLYPDLE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFNIVSKE NGVPLVAFSL KDSSRHNEFE VAEMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMASGKV NGVKKTPEET QREVTAYWKK FVDTKTDKNG VPLVASITNQ
101: VNMIARLFNA PLGDGEAAIG VGTVGSSEAV MLAGLAFKRQ WQNKRKALGL PYDRPNIVTG ANIQVCLEKF ARYFEVELKE VKLREGYYVM DPDKAVEMVD
201: ENTICVVAIL GSTLTGEFED VKLLNDLLVE KNKKTGWDTP IHVDAASGGF IAPFLYPDLE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFNIVSKE NGVPLVAFSL KDSSRHNEFE VAEMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMASGKV NGVKKTPEET QREVTAYWKK FVDTKTDKNG VPLVASITNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.