Factsheet for TraesCS4B01G231400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G075600.1	Wheat	cytosol	97.8	97.8
HORVU4Hr1G064790.6	Barley	cytosol	95.8	96.38
TraesCS4D01G232700.1	Wheat	cytosol	98.6	93.37
EER95206	Sorghum	cytosol	89.4	91.22
Os03t0236200-01	Rice	plasma membrane	89.0	90.45
Zm00001d047981_P001	Maize	cytosol	88.6	90.41
GSMUA_Achr8P30730_001	Banana	cytosol	81.8	86.29
VIT_04s0079g00600.t01	Wine grape	cytosol	82.4	84.43
VIT_01s0011g06600.t01	Wine grape	cytosol	83.4	84.24
TraesCS4B01G052300.1	Wheat	cytosol	82.8	83.64
GSMUA_Achr4P31270_001	Banana	cytosol	81.2	83.03
Solyc11g011920.1.1	Tomato	plastid	82.0	81.51
AT5G17330.1	Thale cress	cytosol	81.6	81.27
Solyc05g054050.2.1	Tomato	plastid	80.6	81.09
PGSC0003DMT400034693	Potato	cytosol	81.4	81.08
KRH72934	Soybean	cytosol	80.8	80.32
KRH17286	Soybean	cytosol	80.0	79.52
KRG97998	Soybean	endoplasmic reticulum	80.0	79.52
AT1G65960.2	Thale cress	cytosol	78.0	78.95
KRH30893	Soybean	endoplasmic reticulum	64.0	78.43
AT2G02000.1	Thale cress	cytosol	78.2	78.2
TraesCS3B01G022900.1	Wheat	cytosol	72.4	73.88
AT2G02010.2	Thale cress	plastid	80.4	73.76
TraesCS2B01G333700.1	Wheat	plastid	75.2	73.29
TraesCS3B01G583600.1	Wheat	cytosol, plastid	72.2	72.06
TraesCS2B01G334000.1	Wheat	cytosol	68.6	68.74
CDX70758	Canola	cytosol	14.4	61.02
CDX78746	Canola	cytosol	17.4	56.86
Bra006404.1-P	Field mustard	cytosol	17.4	56.86
CDX78742	Canola	cytosol	9.4	49.47
Bra006399.1-P	Field mustard	cytosol, mitochondrion	9.2	48.42
TraesCS3B01G100600.1	Wheat	golgi	20.0	18.55

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS4B01G231400	EnsemblPlants:TraesCS4B01G231400.1
TIGR:cd06450	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:483333376..483335441

Molecular Weight (calculated)

56514.8 Da

IEP (calculated)

5.530

GRAVY (calculated)

-0.239

Length

500 amino acids

Sequence
(BLAST)

001: MVLSRASSDT DVSVHSTFAS RYVRSSLPRY RMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMASI NKNYVDMDEY PVTTDLQNRC
101: VNMIAHLFHA PLGESETAVG VGTVGSSEAI MLAGLAFKRR WQNKRKAEGK PFDKPNIITG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEQAVEMVD
201: ENTICVAAIL GSTLNGEFED VKRINDLLEE KNKQTGWETP IHVDAASGGF IAPFLYPELE WDFRLPWVKS INVSGHKYGL VYPGIGWCVW RTKEDLPDEL
301: IFHINYLGSD QPTFTLNFSK GSSQVIGQYY QLIRHGIEGY TNIMENCQEN AMVVKEGLEK TGRFNIVSKD EGVPLVAFSL KDHSRHDEFE ISDMLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREEFSRTLA ERLVLDIDTV MAQLDALPSK LTPPALLPAT LPKTVVVANG HVKKTELETQ KSVTEAWKKF VLAKKTNGVC

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.