Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004137.1-P | Field mustard | cytosol | 74.29 | 93.62 |
| CDY07474 | Canola | cytosol | 92.51 | 92.51 |
| CDY39258 | Canola | cytosol | 92.11 | 92.11 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 79.15 | 82.49 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 81.38 | 82.38 |
| TraesCS4A01G369200.1 | Wheat | cytosol | 75.1 | 81.72 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 81.58 | 81.41 |
| EER95206 | Sorghum | cytosol | 80.36 | 81.02 |
| AT5G17330.1 | Thale cress | cytosol | 81.98 | 80.68 |
| TraesCS4B01G052300.1 | Wheat | cytosol | 80.57 | 80.4 |
| Os03t0720300-01 | Rice | plastid | 79.96 | 80.28 |
| Zm00001d047981_P001 | Maize | cytosol | 79.55 | 80.2 |
| TraesCS4D01G052500.1 | Wheat | plastid | 80.36 | 80.2 |
| TraesCS4A01G262600.1 | Wheat | cytosol | 80.36 | 80.2 |
| EER93555 | Sorghum | cytosol | 79.96 | 80.12 |
| Zm00001d033805_P001 | Maize | cytosol, extracellular | 79.76 | 79.92 |
| Os03t0236200-01 | Rice | plasma membrane | 78.95 | 79.27 |
| TraesCS4B01G231400.1 | Wheat | cytosol | 78.95 | 78.0 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 77.13 | 77.91 |
| TraesCS4A01G075600.1 | Wheat | cytosol | 78.14 | 77.2 |
| AT2G02000.1 | Thale cress | cytosol | 78.14 | 77.2 |
| AT3G17760.1 | Thale cress | cytosol | 74.29 | 74.29 |
| TraesCS4D01G232700.1 | Wheat | cytosol | 79.35 | 74.24 |
| AT2G02010.2 | Thale cress | plastid | 79.76 | 72.29 |
| AT3G17720.1 | Thale cress | mitochondrion | 25.91 | 65.98 |
| Os05t0421750-00 | Rice | mitochondrion | 20.24 | 38.31 |
| AT1G27980.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 18.83 | 17.1 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | EntrezGene:842908 | UniProt:A0A178WE81 | ProteinID:AAF06056.1 | ProteinID:AEE34444.1 | ProteinID:AEE34445.1 |
| EMBL:AF428294 | EMBL:AF428372 | EMBL:AK222191 | EMBL:AK222219 | ProteinID:ANM58050.1 | ProteinID:ANM58051.1 |
| ArrayExpress:AT1G65960 | EnsemblPlantsGene:AT1G65960 | RefSeq:AT1G65960 | TAIR:AT1G65960 | RefSeq:AT1G65960-TAIR-G | EnsemblPlants:AT1G65960.2 |
| TAIR:AT1G65960.2 | EMBL:AY081259 | EMBL:AY124873 | Unigene:At.24993 | Symbol:GAD2 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0006536 |
| GO:GO:0006807 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016831 |
| GO:GO:0019752 | GO:GO:0030170 | InterPro:Glutamate_decarboxylase | InterPro:IPR015421 | RefSeq:NP_001117556.1 | RefSeq:NP_001319328.1 |
| RefSeq:NP_001320515.1 | RefSeq:NP_176771.2 | ProteinID:OAP15795.1 | PFAM:PF00282 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005020 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43321 |
| PANTHER:PTHR43321:SF9 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | UniProt:Q42472 | SUPFAM:SSF53383 |
| TIGRFAMs:TIGR01788 | EMBL:U46665 | EMBL:U49937 | UniParc:UPI0000000D3E | SEG:seg | : |
Description
GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
Coordinates
chr1:+:24552003..24557730
Molecular Weight (calculated)
56143.7 Da
IEP (calculated)
5.066
GRAVY (calculated)
-0.206
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.