Factsheet for Os05t0421750-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70758	Canola	cytosol	21.07	46.61
Bra006399.1-P	Field mustard	cytosol, mitochondrion	15.33	42.11
CDX78742	Canola	cytosol	15.33	42.11
Bra006404.1-P	Field mustard	cytosol	24.52	41.83
CDX78746	Canola	cytosol	24.52	41.83
KRH30893	Soybean	endoplasmic reticulum	35.63	22.79
Os03t0236200-01	Rice	plasma membrane	42.53	22.56
EER93555	Sorghum	cytosol	40.23	21.3
Zm00001d033805_P001	Maize	cytosol, extracellular	39.46	20.89
VIT_01s0011g06600.t01	Wine grape	cytosol	39.08	20.61
GSMUA_Achr8P30730_001	Banana	cytosol	37.16	20.46
TraesCS4A01G262600.1	Wheat	cytosol	38.7	20.4
TraesCS4B01G052300.1	Wheat	cytosol	38.7	20.4
HORVU4Hr1G008700.1	Barley	cytosol	38.7	20.4
TraesCS4D01G052500.1	Wheat	plastid	38.7	20.4
AT1G65960.2	Thale cress	cytosol	38.31	20.24
Os03t0720300-01	Rice	plastid	37.93	20.12
AT5G17330.1	Thale cress	cytosol	38.7	20.12
GSMUA_Achr4P31270_001	Banana	cytosol	37.55	20.04
Solyc11g011920.1.1	Tomato	plastid	38.31	19.88
VIT_04s0079g00600.t01	Wine grape	cytosol	37.16	19.88
PGSC0003DMT400034693	Potato	cytosol	37.93	19.72
AT2G02000.1	Thale cress	cytosol	37.16	19.4
KRH72934	Soybean	cytosol	37.16	19.28
KRH17286	Soybean	cytosol	37.16	19.28
KRG97998	Soybean	endoplasmic reticulum	37.16	19.28
Solyc05g054050.2.1	Tomato	plastid	36.4	19.11
AT2G02010.2	Thale cress	plastid	37.16	17.8
Os04t0447400-01	Rice	plasma membrane	32.18	17.36
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	32.95	17.3
Os04t0447800-01	Rice	cytosol, plasma membrane	27.97	14.6
Os01t0100900-01	Rice	nucleus	11.49	5.57

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.90.1150.160	MapMan:35.1
UniProt:A0A0P0WML7	ProteinID:BAS94084.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488
GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0030170	InterPro:Glutamate_decarboxylase
EnsemblPlantsGene:Os05g0421750	EnsemblPlants:Os05t0421750-00	PANTHER:PTHR43321	PANTHER:PTHR43321:SF9	InterPro:PyrdxlP-dep_Trfase	SUPFAM:SSF53383
UniParc:UPI0003938778	SEG:seg	:	:	:	:

Description

Similar to Glutamate decarboxylase. (Os05t0421750-00)

Coordinates

chr5:-:20683551..20684336

Molecular Weight (calculated)

29130.1 Da

IEP (calculated)

8.607

GRAVY (calculated)

-0.418

Length

261 amino acids

Sequence
(BLAST)

001: PWFCPTWWLS QRGTHVGPTC QHCHISLLSL FLSSLPSSYL SLRSLQLRVC EAGEEEGVGD RRPATDHVAA GEGAVCGRPG AERRPLVAFS LKDRSLHDEF
101: EIDMLRRFGW IVPAYTMPPD AMVLRFVIRE EFSRTLAERL VLDIEKVMCQ LDALPSRLMP PVPPAPPSVS MGAHRAPPRR RAPHGPPLHS MDLALRVDLL
201: SAGGRHASPS PPPLAGAIEA PPSSSPASHC WPQQTHSRRE QRERNEMGDK RGKERRLMWQ C

Best Arabidopsis Sequence Match ( AT5G17330.1 )
(BLAST)

001: MVLSHAVSES DVSVHSTFAS RYVRTSLPRF KMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMSSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PLEEAETAVG VGTVGSSEAI MLAGLAFKRK WQNKRKAEGK PVDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLSEGYYVM DPQQAVDMVD
201: ENTICVAAIL GSTLNGEFED VKLLNDLLVE KNKETGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RNKEDLPEEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGHEGY RNVMENCREN MIVLREGLEK TERFNIVSKD EGVPLVAFSL KDSSCHTEFE ISDMLRRYGW
401: IVPAYTMPPN AQHITVLRVV IREDFSRTLA ERLVIDIEKV MRELDELPSR VIHKISLGQE KSESNSDNLM VTVKKSDIDK QRDIITGWKK FVADRKKTSG
501: IC

Arabidopsis Description

GAD1Glutamate decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42521]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.