Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G022600.3 | Wheat | cytosol | 98.16 | 98.16 |
| TraesCS3D01G023900.1 | Wheat | cytosol | 97.96 | 97.96 |
| HORVU3Hr1G003050.7 | Barley | cytosol | 93.06 | 93.06 |
| TraesCS3B01G583600.1 | Wheat | cytosol, plastid | 83.06 | 81.24 |
| Os08t0465800-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 79.8 | 78.67 |
| TraesCS4B01G052300.1 | Wheat | cytosol | 76.33 | 75.56 |
| TraesCS4B01G231400.1 | Wheat | cytosol | 73.88 | 72.4 |
| TraesCS2B01G333700.1 | Wheat | plastid | 75.71 | 72.32 |
| OQU80616 | Sorghum | plastid | 84.69 | 69.4 |
| TraesCS2B01G334000.1 | Wheat | cytosol | 69.8 | 68.54 |
| Zm00001d031749_P005 | Maize | cytosol | 66.73 | 62.52 |
| TraesCS3B01G100600.1 | Wheat | golgi | 20.0 | 18.18 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 | GO:GO:0005488 | GO:GO:0006536 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 |
| InterPro:Glutamate_decarboxylase | InterPro:IPR015421 | PFAM:PF00282 | PANTHER:PTHR43321 | PANTHER:PTHR43321:SF7 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | SUPFAM:SSF53383 | TIGRFAMs:TIGR01788 | EnsemblPlantsGene:TraesCS3B01G022900 | EnsemblPlants:TraesCS3B01G022900.1 |
| TIGR:cd06450 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:9914080..9917550
Molecular Weight (calculated)
54370.4 Da
IEP (calculated)
5.532
GRAVY (calculated)
-0.095
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVTVAATGS DTAEPLHSTT FASRYVRDQL PRYRMPEGSI PKEAAYQIIS DELMLDGNPR LNLASFVTTW MEPECGKLIM DSVNKNYVDM DEYPVTTELQ
101: NRCVNMIAHL FNAPIGEDET AIGVSTVGSS EAIMLAGLAF KRKWANKMKE QGKPCDKPNI VTGANVQVCW EKFARYFEVE LKEVKLTEGY YVMDPKKAIE
201: MVDENTICVA AILGSTLTGE YEDVKLLNDL LVEKNKKTGW NVPIHVDAAS GGFIAPFLQP ELEWDFRLPL VKSINVSGHK YGLVYPGVGW VIWRSKDDLP
301: DELIFHINYL GTDQPTFTLN FSKGASQIIA QYYQLIRLGF EGYKHIMENC KLNAAVLKEG IDATGRFDVL SKADGVPLVA IRLKDSTNFS VFDISENLRR
401: FGWIVPAYTM PADAEHVAVL RIVIREDFNR SLAQRLLADI NKIVRELDAH AVHAIKLSNA AAAEGASKST VDAVTEAFKG LAGNKKAGVC
101: NRCVNMIAHL FNAPIGEDET AIGVSTVGSS EAIMLAGLAF KRKWANKMKE QGKPCDKPNI VTGANVQVCW EKFARYFEVE LKEVKLTEGY YVMDPKKAIE
201: MVDENTICVA AILGSTLTGE YEDVKLLNDL LVEKNKKTGW NVPIHVDAAS GGFIAPFLQP ELEWDFRLPL VKSINVSGHK YGLVYPGVGW VIWRSKDDLP
301: DELIFHINYL GTDQPTFTLN FSKGASQIIA QYYQLIRLGF EGYKHIMENC KLNAAVLKEG IDATGRFDVL SKADGVPLVA IRLKDSTNFS VFDISENLRR
401: FGWIVPAYTM PADAEHVAVL RIVIREDFNR SLAQRLLADI NKIVRELDAH AVHAIKLSNA AAAEGASKST VDAVTEAFKG LAGNKKAGVC
001: MVLSKTVSES DVSIHSTFAS RYVRNSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC
Arabidopsis Description
GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.