Factsheet for TraesCS3D01G023900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G022600.3	Wheat	cytosol	99.39	99.39
TraesCS3B01G022900.1	Wheat	cytosol	97.96	97.96
HORVU3Hr1G003050.7	Barley	cytosol	92.65	92.65
TraesCS3D01G523200.1	Wheat	cytosol, plastid	82.86	81.04
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	79.8	78.67
TraesCS2D01G313500.1	Wheat	plastid	75.92	76.54
TraesCS4D01G052500.1	Wheat	plastid	76.73	75.96
OQU80616	Sorghum	plastid	85.1	69.73
TraesCS4D01G232700.1	Wheat	cytosol	73.88	68.56
TraesCS2D01G313800.1	Wheat	cytosol	69.59	68.34
Zm00001d031749_P005	Maize	cytosol	66.53	62.33
TraesCS3D01G085400.1	Wheat	plasma membrane	19.8	18.0

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS3D01G023900	EnsemblPlants:TraesCS3D01G023900.1
TIGR:cd06450	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:7590130..7593540

Molecular Weight (calculated)

54150.1 Da

IEP (calculated)

5.373

GRAVY (calculated)

-0.064

Length

490 amino acids

Sequence
(BLAST)

001: MVVTVAATGS DTAEPLHSTT FASRYVRDQL PRYRMPSGSI PKEAAYQIIS DELMLDGNPR LNLASFVTTW MEPECGKLMM DSVNKNYVDM DEYPVTTELQ
101: NRCVNMIAHL FNAPIGEDET AIGVSTVGSS EAIMLAGLAF KRKWANKMKE QGKPCDKPNI VTGANVQVCW EKFARYFEVE LKEVKLTEGY YVMDPKKAVE
201: MVDENTICVA AILGSTLTGE YEDVKLLNDL LVAKNKETGW DVPIHVDAAS GGFIAPFLQP ELEWDFRLPL VKSINVSGHK YGLVYPGVGW VIWRSKADLP
301: DELIFHINYL GTDQPTFTLN FSKGASQIIA QYYQLIRLGF EGYKHIMENC KLNAAVLKEG IDATGRFDVL SKADGVPLVA IRLKDSTNFS VFDISENLRR
401: FGWIVPAYTM PADAEHVAVL RIVIREDFNR SLAQRLLTDI NKIVGELDAH AVHAIKLSTA AAAEGASKST VDAVTEAFKG LAGNKKAGVC

Best Arabidopsis Sequence Match ( AT2G02010.1 )
(BLAST)

001: MVLSKTVSES DVSIHSTFAS RYVRNSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLREDYYVM DPVKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTP IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKTDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMDNCREN MMVLRQGLEK TGRFKIVSKE NGVPLVAFSL KDSSRHNEFE VAHTLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKV NGVKKTPEET QREVTAYWKK LLETKKTNKN TIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.