Factsheet for TraesCS2D01G313500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G315300.1	Wheat	plastid	99.38	99.38
HORVU2Hr1G078560.1	Barley	plastid	95.27	95.27
TraesCS2B01G333700.1	Wheat	plastid	98.56	93.37
Os04t0447400-01	Rice	plasma membrane	89.51	89.88
EES12248	Sorghum	plastid	89.71	89.34
Zm00001d003531_P002	Maize	plastid	88.89	88.34
GSMUA_Achr8P22810_001	Banana	cytosol	78.81	80.8
TraesCS4D01G052500.1	Wheat	plastid	79.84	78.38
TraesCS3D01G023900.1	Wheat	cytosol	76.54	75.92
Bra022241.1-P	Field mustard	cytosol	76.34	75.71
AT3G17760.1	Thale cress	cytosol	76.95	75.71
Bra021272.1-P	Field mustard	cytosol	76.54	75.61
KRH38971	Soybean	cytosol	76.95	75.1
GSMUA_Achr7P02370_001	Banana	cytosol	76.95	74.95
Solyc03g098240.2.1	Tomato	plastid	77.37	74.9
KRH09492	Soybean	cytosol	76.75	74.75
PGSC0003DMT400079706	Potato	cytosol	77.16	74.7
VIT_17s0000g00920.t01	Wine grape	cytosol	77.57	74.65
TraesCS3D01G523200.1	Wheat	cytosol, plastid	75.72	73.45
TraesCS4D01G232700.1	Wheat	cytosol	77.57	71.4
TraesCS2D01G313800.1	Wheat	cytosol	70.58	68.74
AT3G17720.1	Thale cress	mitochondrion	26.75	67.01
CDX87977	Canola	cytosol	29.42	62.72
TraesCS3D01G085400.1	Wheat	plasma membrane	19.75	17.81

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF1	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS2D01G313500	EnsemblPlants:TraesCS2D01G313500.1

Description

No Description!

Coordinates

chr2D:-:403345337..403347997

Molecular Weight (calculated)

55046.1 Da

IEP (calculated)

6.461

GRAVY (calculated)

-0.207

Length

486 amino acids

Sequence
(BLAST)

001: MALSRAQTNS GESLISSTFA SRYVRTALPR FRIPEQSIPK DAAYQIINDE LMLDGNPRLN LASFVTTWME PECDKLIQNS VNKNYVDMDE YPVTTEFQNR
101: CVNMIAHLFN APIGEDETAV GVGTVGSSEA IMLAGLAFKR KWQNKMKAEG KPHDKPNIVT GANVQVCWEK FARYFEVELK EVKLREGYYV MDPAKAVELV
201: DENTICVAAI LGSTLNGEFE DVKMLNDLLV AKNAETGWDT PIHVDAASGG FIAPFIYPEL EWDFRLPLVK SINVSGHKYG LVYAGVGWII WRNKEDLPDE
301: LIFHINYLGA DQPTFTLNFS KGSSQIIAQY YQLIRLGFEG YKDIMQNCRD NAAVLREGVE KMGYFHLVSK DSGVPLVAFS LKDSSKYTVF EVVESLRRFG
401: WIVPAYTMPA DAEHIAVMRV VIREDFSRGL AERLITDLHK VMVEMDAHAK KHGHHEHVKK TAHQIEKEVT TYWRTFVARK KHSLVC

Best Arabidopsis Sequence Match ( AT3G17760.2 )
(BLAST)

001: MVLATNSDSD EHLHSTFASR YVRAVVPRFK MPDHCMPKDA AYQVINDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSVN KNYVDMDEYP VTTELQNRCV
101: NMIANLFHAP VGEDEAAIGC GTVGSSEAIM LAGLAFKRKW QHRRKAQGLP IDKPNIVTGA NVQVCWEKFA RYFEVELKEV KLSEDYYVMD PAKAVEMVDE
201: NTICVAAILG STLTGEFEDV KQLNDLLAEK NAETGWETPI HVDAASGGFI APFLYPDLEW DFRLPWVKSI NVSGHKYGLV YAGVGWVVWR TKDDLPEELV
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ FIRLGFEGYK NIMENCMDNA RRLREGIEMT GKFNIVSKDI GVPLVAFSLK DSSKHTVFEI AESLRKFGWI
401: IPAYTMPADA QHIAVLRVVI REDFSRGLAD RLITHIIQVL KEIEGLPSRI AHLAAAAAVS GDDEEVKVKT AKMSLEDITK YWKRLVEHKR NIVC

Arabidopsis Description

GAD5Glutamate decarboxylase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.