Factsheet for Bra026621.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09396	Canola	cytosol	99.19	99.19
Bra017429.1-P	Field mustard	cytosol	96.96	96.96
AT2G02000.1	Thale cress	cytosol	91.68	90.4
GSMUA_Achr8P30730_001	Banana	cytosol	84.18	87.55
VIT_01s0011g06600.t01	Wine grape	cytosol	87.22	86.87
Solyc04g025530.2.1	Tomato	plastid	86.82	86.82
AT2G02010.2	Thale cress	plastid	95.74	86.61
VIT_04s0079g00600.t01	Wine grape	cytosol	84.79	85.66
PGSC0003DMT400058594	Potato	cytosol	85.8	85.11
Solyc01g005000.2.1	Tomato	cytosol	82.96	84.5
Bra006397.1-P	Field mustard	cytosol	86.0	84.46
Bra008561.1-P	Field mustard	cytosol	80.53	84.29
Bra006396.1-P	Field mustard	cytosol, plastid	83.57	83.06
Bra004137.1-P	Field mustard	cytosol	65.52	82.4
GSMUA_Achr4P31270_001	Banana	cytosol	81.34	82.0
Bra021090.1-P	Field mustard	cytosol	81.34	81.17
Bra023612.1-P	Field mustard	cytosol	76.67	80.08
Bra022241.1-P	Field mustard	cytosol	75.46	75.92
Bra021272.1-P	Field mustard	cytosol	74.64	74.8
PGSC0003DMT400003251	Potato	cytosol	22.92	73.86
Bra006404.1-P	Field mustard	cytosol	17.44	56.21
Bra006399.1-P	Field mustard	cytosol, mitochondrion	10.34	53.68
Bra032860.1-P	Field mustard	cytosol	3.04	21.13
Bra010909.1-P	Field mustard	plastid	19.47	17.65

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EnsemblPlantsGene:Bra026621	EnsemblPlants:Bra026621.1	EnsemblPlants:Bra026621.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M4ECW1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002546A8C	SEG:seg	:

Description

AT2G02010 (E=2e-271) GAD4 | GAD4 (glutamate decarboxylase 4); calmodulin binding

Coordinates

chrA02:+:20788411..20790833

Molecular Weight (calculated)

55898.0 Da

IEP (calculated)

5.762

GRAVY (calculated)

-0.277

Length

493 amino acids

Sequence
(BLAST)

001: MVLSKTASET DASIHSTFAS RYVRTSLPRF EMPENSIPKE AAYQIINDEL MLDGNPRLNL ASFVTTWMEP ECDKLMMESI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDGEAAVG VGTVGSSEAI MLAGLAFKRQ WQNKRKAQGL PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLREGYYVM DPEKAVELVD
201: ENTICVAAIL GSTLTGEFED VKLLNDLLVE KNKQTGWDTG IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTKSDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQVIAQYY QLIRLGFEGY RNVMENCREN MMVLRQGLEK TGRFNIVSKE NGVPLVAFSL KDSSRHDEFE VAETLRRFGW
401: IVPAYTMPAD AQHVTVLRVV IREDFSRTLA ERLVADFEKV LHELDTLPAR VHAKMANGKA NGVKKTEEET TREVTAYWKK FVETKKSNKN RIC

Best Arabidopsis Sequence Match ( AT2G02010.2 )
(BLAST)

001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC

Arabidopsis Description

GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.