Factsheet for Bra021090.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28614	Canola	cytosol	79.35	100.0
Bra004137.1-P	Field mustard	cytosol	75.1	94.64
Bra008561.1-P	Field mustard	cytosol	79.55	83.44
Bra017429.1-P	Field mustard	cytosol	81.17	81.34
Bra026621.1-P	Field mustard	cytosol	81.17	81.34
VIT_04s0079g00600.t01	Wine grape	cytosol	79.96	80.94
Bra006397.1-P	Field mustard	cytosol	82.19	80.88
GSMUA_Achr8P30730_001	Banana	cytosol	77.53	80.8
VIT_01s0011g06600.t01	Wine grape	cytosol	79.96	79.8
Bra006396.1-P	Field mustard	cytosol, plastid	79.96	79.64
Bra023612.1-P	Field mustard	cytosol	75.1	78.6
GSMUA_Achr4P31270_001	Banana	cytosol	75.1	75.87
Bra021272.1-P	Field mustard	cytosol	72.47	72.76
Bra022241.1-P	Field mustard	cytosol	71.86	72.45
Bra006399.1-P	Field mustard	cytosol, mitochondrion	10.93	56.84
Bra006404.1-P	Field mustard	cytosol	17.41	56.21
Bra032860.1-P	Field mustard	cytosol	3.04	21.13
Bra010909.1-P	Field mustard	plastid	18.83	17.1

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EnsemblPlantsGene:Bra021090	EnsemblPlants:Bra021090.1	EnsemblPlants:Bra021090.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004351	GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	InterPro:IPR015421
UniProt:M4DX44	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF2	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major
InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	UniParc:UPI0002543FA4	:	:

Description

AT1G65960 (E=4e-259) GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase

Coordinates

chrA01:+:24092145..24098807

Molecular Weight (calculated)

55978.6 Da

IEP (calculated)

6.003

GRAVY (calculated)

-0.206

Length

494 amino acids

Sequence
(BLAST)

001: MVLSRTTTES NEPVSSTFGS RYALTALPKY EIGESSIPKD AAYQIIKDEL MLDGNPRLNL ASFVTTWMEP ECDKLIMDSI NKNYVDMDEY PVTTELQNRC
101: VNMIARLFNA PLGDTETAMG VGTVGSSEAI MLAGLAFKRN WQNKRKAEGK TYDKPNIVTG ANVQVCWEKF ARYFEVELKE IKLSEGYYVM DPEKAVEMVD
201: ENTICVAAIL GSTLTGEFED VKRLNDLLVK KNDATGWNTP IHVDAASGGF IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RTQHDLPDEL
301: IFHINYLGAD QPTFTLNFSK GSSQIIAQYY QLIRLGFEGY KNVMENCREN MLVLKEGIEK TERFNIVSKD VGVPLVAFSL KGQSFHSEFE ISEMLRRFGW
401: IVPAYTMPAD AEHITVLRVV IREDFSRTLA ERLVADILKV LHELDTLPSK ISRKMGAEDF GNVKGKKVKR EKLMEVIVGW RKFVKDRKKM NGVC

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.