Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058594 | Potato | cytosol | 95.87 | 93.36 |
| Solyc04g025530.2.1 | Tomato | plastid | 92.15 | 90.47 |
| CDY15807 | Canola | cytosol | 84.92 | 83.37 |
| GSMUA_Achr8P30730_001 | Banana | cytosol | 81.61 | 83.33 |
| CDY09396 | Canola | cytosol | 84.71 | 83.16 |
| Bra026621.1-P | Field mustard | cytosol | 84.5 | 82.96 |
| VIT_01s0011g06600.t01 | Wine grape | cytosol | 84.09 | 82.22 |
| VIT_04s0079g00600.t01 | Wine grape | cytosol | 82.85 | 82.17 |
| CDY04111 | Canola | cytosol | 83.68 | 82.15 |
| Bra017429.1-P | Field mustard | cytosol | 83.68 | 82.15 |
| CDY56295 | Canola | cytosol | 83.26 | 81.58 |
| Solyc11g011920.1.1 | Tomato | plastid | 83.88 | 80.72 |
| Solyc05g054050.2.1 | Tomato | plastid | 82.85 | 80.68 |
| GSMUA_Achr4P31270_001 | Banana | cytosol | 79.55 | 78.73 |
| AT2G02000.1 | Thale cress | cytosol | 80.99 | 78.4 |
| AT2G02010.2 | Thale cress | plastid | 83.88 | 74.5 |
| Solyc03g098240.2.1 | Tomato | plastid | 73.76 | 71.12 |
| Solyc05g015860.2.1 | Tomato | plastid | 20.25 | 18.22 |
Protein Annotations
| KEGG:00250+4.1.1.15 | KEGG:00410+4.1.1.15 | KEGG:00430+4.1.1.15 | KEGG:00650+4.1.1.15 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.160 |
| MapMan:4.1.1.1.3.1 | EMBL:AB359915 | UniProt:B1Q3F2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004351 |
| GO:GO:0005488 | GO:GO:0006536 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016829 |
| GO:GO:0016831 | GO:GO:0019752 | GO:GO:0030170 | InterPro:Glutamate_decarboxylase | InterPro:IPR015421 | PFAM:PF00282 |
| PANTHER:PTHR43321 | PANTHER:PTHR43321:SF2 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | InterPro:PyrdxlP-dep_de-COase | SUPFAM:SSF53383 |
| EnsemblPlantsGene:Solyc01g005000.2 | EnsemblPlants:Solyc01g005000.2.1 | TIGRFAMs:TIGR01788 | UniParc:UPI0001720466 | SEG:seg | : |
Description
Glutamate decarboxylase [Source:UniProtKB/TrEMBL;Acc:B1Q3F2]
Coordinates
chr1:+:12963..15149
Molecular Weight (calculated)
55183.6 Da
IEP (calculated)
5.993
GRAVY (calculated)
-0.211
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSKTPSDD SVHSTFASRY VRTSLPRFEM LEKSIPKEAA YQMINDELML DGNPRLNLAS FVTTWMEPEC DKLMMASINK NYVDMDEYPV TTELQNRCVN
101: MIARLFNAPL KEEEIGIGVG TVGSSEAIML AGLAFKRNWQ NKRKAEGKPY DKPNIVTGAN VQVCWEKFAN YFEVELKQVK LSEGYYVMDP IKAVEMVDDN
201: TICVAAILGS TLNGEFEDVK LLNDLLIEKN KQTGWDTPIH VDAASGGFIA PFIYPELEWD FRLPLVKSIN VSGHKYGLVY AGIGWVIWRT KQDLPQQLIF
301: HINYLGADQP TFTLNFSKGS SQVIAQYYQL IRLGYEGYRN VMENCRENAI VLRKGLEKTG RFNIISKDEG IPLVAFSLKD NSLHNEFEVS ETLRRFGWIV
401: PAYTMPADLQ HVTVLRVVIR EDFSRTLADR LVSDIVKVLH ELPNAKKVED NLMINNEKKT EIEVQRAIAE FWKKYVLARK ASIC
101: MIARLFNAPL KEEEIGIGVG TVGSSEAIML AGLAFKRNWQ NKRKAEGKPY DKPNIVTGAN VQVCWEKFAN YFEVELKQVK LSEGYYVMDP IKAVEMVDDN
201: TICVAAILGS TLNGEFEDVK LLNDLLIEKN KQTGWDTPIH VDAASGGFIA PFIYPELEWD FRLPLVKSIN VSGHKYGLVY AGIGWVIWRT KQDLPQQLIF
301: HINYLGADQP TFTLNFSKGS SQVIAQYYQL IRLGYEGYRN VMENCRENAI VLRKGLEKTG RFNIISKDEG IPLVAFSLKD NSLHNEFEVS ETLRRFGWIV
401: PAYTMPADLQ HVTVLRVVIR EDFSRTLADR LVSDIVKVLH ELPNAKKVED NLMINNEKKT EIEVQRAIAE FWKKYVLARK ASIC
001: MKRHILSTIY TICSSSSNST HSSSTTKQKH YYTFFPLVHF KPKNQSSKLK EDMVLSKTVS ESDVSIHSTF ASRYVRNSLP RFEMPENSIP KEAAYQIIND
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC
101: ELMLDGNPRL NLASFVTTWM EPECDKLMME SINKNYVDMD EYPVTTELQN RCVNMIARLF NAPLGDGEAA VGVGTVGSSE AIMLAGLAFK RQWQNKRKAQ
201: GLPYDKPNIV TGANVQVCWE KFARYFEVEL KEVNLREDYY VMDPVKAVEM VDENTICVAA ILGSTLTGEF EDVKLLNDLL VEKNKQTGWD TPIHVDAASG
301: GFIAPFLYPE LEWDFRLPLV KSINVSGHKY GLVYAGIGWV VWRTKTDLPD ELIFHINYLG ADQPTFTLNF SKGSSQVIAQ YYQLIRLGFE GYRNVMDNCR
401: ENMMVLRQGL EKTGRFKIVS KENGVPLVAF SLKDSSRHNE FEVAHTLRRF GWIVPAYTMP ADAQHVTVLR VVIREDFSRT LAERLVADFE KVLHELDTLP
501: ARVHAKMANG KVNGVKKTPE ETQREVTAYW KKLLETKKTN KNTIC
Arabidopsis Description
GAD4glutamate decarboxylase 4 [Source:TAIR;Acc:AT2G02010]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.