Factsheet for TraesCS3A01G515300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G523200.1	Wheat	cytosol, plastid	99.2	99.2
TraesCS3B01G583600.1	Wheat	cytosol, plastid	98.6	98.6
HORVU3Hr1G112860.1	Barley	cytosol	93.81	94.57
TraesCS3A01G022600.3	Wheat	cytosol	81.24	83.06
Os08t0465800-01	Rice	cytosol, extracellular, plasma membrane, plastid	80.64	81.29
TraesCS4A01G369200.1	Wheat	cytosol	70.26	77.53
TraesCS4A01G262600.1	Wheat	cytosol	74.65	75.56
TraesCS2A01G315300.1	Wheat	plastid	73.05	75.31
TraesCS4A01G075600.1	Wheat	cytosol	72.46	72.6
OQU80616	Sorghum	plastid	80.04	67.06
TraesCS2A01G315800.1	Wheat	cytosol	66.67	66.93
Zm00001d031749_P005	Maize	cytosol	63.67	60.99
TraesCS3A01G085400.2	Wheat	plasma membrane	17.96	16.25

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351	GO:GO:0005488	GO:GO:0006536
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016831	GO:GO:0019752	GO:GO:0030170
InterPro:Glutamate_decarboxylase	InterPro:IPR015421	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF7	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	TIGRFAMs:TIGR01788	EnsemblPlantsGene:TraesCS3A01G515300	EnsemblPlants:TraesCS3A01G515300.1
TIGR:cd06450	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:733490931..733494025

Molecular Weight (calculated)

56036.1 Da

IEP (calculated)

5.390

GRAVY (calculated)

-0.198

Length

501 amino acids

Sequence
(BLAST)

001: MVISHSSSGV GESAYNTFSS RYARVELPRY RMPENSIPKE TAYQMITDEL MLDGNPRLDL ASFVTTWMEP ECDKLIMDSI NKNYVDMDEY PVTTELQNRC
101: VNMIAHLFNA PINEDEKAIG VSTVGSSEAI MLAGLAFKRK WANKRKEEGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VKLTEGYYVM DPLKAVEMVD
201: ENTICVAAIL GSTLTGEYED VKLLNDLLVE KNKETGWNVP IHVDAASGGF IAPFLHPELE WDFRLPLVKS INVSGHKYGL VYPGVGWVVW RSKDDLPEEL
301: IFHINYLGTD QPTFTLNFSK GASQIIAQYY QLIRLGFEGY KHIMENCQAN AAVLREGMEA TGRFSIVSKE DGVPLVAASL KDSTKFSVFD VSENLRKFGW
401: IVPAYTMAPD AEHVAVLRVV IREDFSRSLA QRLLADINKV LHELDTHAAH AIKVTAPTAT QNGNGVNGDD TVTQKSVLDT EKKFVAACMS LVKKNKKTGV
501: C

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.