CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42467	Soybean	nucleus	94.48	90.26
KRH58569	Soybean	cytosol	93.84	89.66
KRH42468	Soybean	cytosol	92.99	88.84
GSMUA_Achr8P30730_001	Banana	cytosol	70.28	69.83
VIT_04s0079g00600.t01	Wine grape	cytosol	70.91	68.44
GSMUA_Achr4P31270_001	Banana	cytosol	69.85	67.28
VIT_01s0011g06600.t01	Wine grape	cytosol	70.7	67.27
KRG97998	Soybean	endoplasmic reticulum	71.13	66.6
KRH30893	Soybean	endoplasmic reticulum	56.9	65.69
KRH17286	Soybean	cytosol	69.64	65.21
KRH72934	Soybean	cytosol	69.64	65.21
KRH38971	Soybean	cytosol	68.58	64.86
KRH09492	Soybean	cytosol	67.3	63.53
CDX87975	Canola	cytosol	10.4	48.04
KRH25771	Soybean	cytosol	4.03	16.38
KRH01552	Soybean	plastid, vacuole	17.83	15.7
KRH70554	Soybean	endoplasmic reticulum	17.41	15.3

Protein Annotations

KEGG:00250+4.1.1.15	KEGG:00410+4.1.1.15	KEGG:00430+4.1.1.15	KEGG:00650+4.1.1.15	Gene3D:3.40.640.10	Gene3D:3.90.1150.160
MapMan:4.1.1.1.3.1	EMBL:ACUP02004804	EnsemblPlantsGene:GLYMA_08G091300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004351
GO:GO:0005488	GO:GO:0006536	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829
GO:GO:0016831	GO:GO:0019752	GO:GO:0030170	InterPro:Glutamate_decarboxylase	UniProt:I1KRN2	InterPro:IPR015421
EnsemblPlants:KRH42466	ProteinID:KRH42466	ProteinID:KRH42466.1	PFAM:PF00282	PANTHER:PTHR43321	PANTHER:PTHR43321:SF2
MetaCyc:PWY-4321	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	InterPro:PyrdxlP-dep_de-COase	SUPFAM:SSF53383	UniParc:UPI000295910C
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:6863963..6866307

Molecular Weight (calculated)

53625.3 Da

IEP (calculated)

5.973

GRAVY (calculated)

-0.378

Length

471 amino acids

Sequence
(BLAST)

001: MVFPRPPSES DLFLHSNFAS RYARDSLPRF SMPEDSMPKE AAYQNIHDEL QLDAIPKLNL ASFVTTSMEE ECNKLIMESI NKNYVDMDEY PITTDLHNRC
101: LNMIARMFHA EIGENENAIG AGTVGSSEAI MLAGLAFKKK WQNKRKAEGK PYDKPNLVTG SNVQVCWEKF ARYFEVELRE VEVREGYYVM DPAKAVELVD
201: ENTICVAAIL GSTYNGEFED VKLLNDLLLE KNKQTGARMG FQTPMVKSIN VSGHKYGLVY AGIGWVIWRT KDDLPEDLVF HINYLGADQP TFTLNFSKGS
301: SQIIAQYYQL IRLGQEGYRN IMENCRENAM VLKEDLEKSG HFNILSKDDG VPVVAFSLKD RSRYDEFKIS EMLRRHGWIV PAYPMPPAAQ HINVLRVVIR
401: AEFSRTLAER LVLDIHSVLD ELEKVHPSKV TKNTKEENKL LVENGVKNTA LDAHSEIIAQ ESNKRQKIMV A

Best Arabidopsis Sequence Match ( AT1G65960.2 )
(BLAST)

001: MVLTKTATND ESVCTMFGSR YVRTTLPKYE IGENSIPKDA AYQIIKDELM LDGNPRLNLA SFVTTWMEPE CDKLIMDSIN KNYVDMDEYP VTTELQNRCV
101: NIIARLFNAP LEESETAVGV GTVGSSEAIM LAGLAFKRKW QNKRKAEGKP YDKPNIVTGA NVQVCWEKFA RYFEVELKEV NLSEGYYVMD PDKAAEMVDE
201: NTICVAAILG STLNGEFEDV KRLNDLLVKK NEETGWNTPI HVDAASGGFI APFIYPELEW DFRLPLVKSI NVSGHKYGLV YAGIGWVVWR AAEDLPEELI
301: FHINYLGADQ PTFTLNFSKG SSQIIAQYYQ LIRLGFEGYK NVMENCIENM VVLKEGIEKT ERFNIVSKDQ GVPVVAFSLK DHSFHNEFEI SEMLRRFGWI
401: VPAYTMPADA QHITVLRVVI REDFSRTLAE RLVADISKVL HELDTLPSKI SKKMGIEGIA ENVKEKKMEK EILMEVIVGW RKFVKERKKM NGVC

Arabidopsis Description

GAD2Glutamate decarboxylase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42472]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.